G181802


Basic Information

Item Value
gene id G181802
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 282369 ~ 282804 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246215
ttagtgtgttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattattaaagatagtgagagattctcctgatctggtagtagaaggtagttagttagaggtgttaggagagtaagtgctctttgaagagctcagtcttcaggagtttattaaagatagtgagagattctcctgatctggtagtagaaggtagttagttagaggtgttag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246215 True 230 lncRNA 0.39 2 282369 282804

Neighbor

gene id symbol gene type direction distance location
LOC111195169 NA coding upstream 17589 258891 ~ 264780 (+)
LOC103031511 NA coding upstream 26186 250476 ~ 256183 (+)
LOC111195167 NA coding upstream 35049 245466 ~ 247320 (+)
LOC103027206 NA coding upstream 75355 202308 ~ 207014 (+)
LOC103030568 camk2d2,LOC107714220,LOC107742503,LOC107563926 coding upstream 174479 65881 ~ 107890 (+)
LOC103032143 NA coding downstream 24873 307677 ~ 315123 (+)
LOC103032759 NA coding downstream 42832 325636 ~ 329837 (+)
LOC103042564 si:dkey-22i16.2,LOC108260510,LOC108434387,LOC107746771,LOC107674260,LOC107556780 coding downstream 49326 332130 ~ 341442 (+)
tacr3 tacr3a,tacr3,LOC108411976,LOC107552719,LOC107746781,LOC107674253,LOC107556806 coding downstream 95424 378228 ~ 426514 (+)
bdh2 bdh2,LOC107746975 coding downstream 180519 463323 ~ 475354 (+)
G181800 NA non-coding upstream 2579 279565 ~ 279790 (+)
G181798 NA non-coding upstream 8536 271554 ~ 273833 (+)
G181797 NA non-coding upstream 13112 268702 ~ 269257 (+)
G181782 rps6kb2,LOC108413157,LOC108260512,LOC103368287,LOC104930044,LOC101478146,LOC102204811 non-coding upstream 51308 211835 ~ 231061 (+)
G181775 NA non-coding upstream 73846 207746 ~ 208523 (+)
G181811 NA non-coding downstream 49776 332580 ~ 333245 (+)
G181816 NA non-coding downstream 149735 432539 ~ 433567 (+)
G181820 NA non-coding downstream 162277 445081 ~ 445298 (+)
G181821 NA non-coding downstream 209794 492598 ~ 500981 (+)
G181927 NA non-coding downstream 347103 629907 ~ 663519 (+)
G181799 NA other upstream 4196 276671 ~ 278173 (+)
G181779 cd027,LOC108413410 other upstream 82373 191957 ~ 199996 (+)
LOC111195149 NA other downstream 6206 289010 ~ 390166 (+)
LOC111195150 NA other downstream 17291 300095 ~ 306312 (+)
G181818 NA other downstream 108810 391614 ~ 392130 (+)
LOC103029952 fgf20,fgf20a,LOC108412830,LOC103364653,LOC108432889,LOC107747399,LOC107721420,LOC107554387,LOC107702330,LOC107657011 other downstream 2174760 2457564 ~ 2460672 (+)
LOC111195173 NA other downstream 2242879 2525683 ~ 2569294 (+)

Expression


Co-expression Network