G181818


Basic Information

Item Value
gene id G181818
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 391614 ~ 392130 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246236
TCTGTTACGGTTTAGTGGGGGAGGTGGACTCAAATGcagagttattttatttacttattttatttatttttatttgcttatttattagtcttattatttattggtaatattatatttgatattactgatgtgtctgtatgtgtgtgcagtTGGTTTGATGGTGTGCTTGAACCAGGGTTTGAACTCCCAACCTTTGTAACTGCAGACGGGTGTGCTACCACTGCACTACTTAGAGTGTGTGCAGTGGCTTTGGATGAGGGCCTTAAATGTGGCAGTGAAGAAAAAGGGCGGGAAAATCAAACAAAGGATCTGCTGCCACATGGCATGGCTCAAACAAAGGAAATTAAATCAAACTTTAAGGAACTTAGAAAAGACttcttgaaaataaaaatttcaaaaataaactgagatcttttctctctcttttgcggcttcttttaagatctctctttttttgtgagcctttgtttcttttgagatcttttttttttgtggcttctttcaatatttctttttt

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0007600 sensory perception biological_process
GO:0007606 sensory perception of chemical stimulus biological_process
GO:0007608 sensory perception of smell biological_process
GO:0003008 system process biological_process

KEGG:

id description
ko04740 Olfactory transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU246236 True 517 TUCP 0.35 1 391614 392130

Neighbor

gene id symbol gene type direction distance location
LOC103042564 si:dkey-22i16.2,LOC108260510,LOC108434387,LOC107746771,LOC107674260,LOC107556780 coding upstream 50172 332130 ~ 341442 (+)
LOC103032759 NA coding upstream 61777 325636 ~ 329837 (+)
LOC103032143 NA coding upstream 76491 307677 ~ 315123 (+)
LOC111195169 NA coding upstream 126834 258891 ~ 264780 (+)
LOC103031511 NA coding upstream 135431 250476 ~ 256183 (+)
bdh2 bdh2,LOC107746975 coding downstream 71193 463323 ~ 475354 (+)
LOC103047018 LOC108434388 coding downstream 83541 475671 ~ 495422 (+)
suclg1 suclg1 coding downstream 117521 509651 ~ 540134 (+)
lrrtm1 lrrtm1,LOC107706126,LOC107551676,LOC107689474,LOC107558618 coding downstream 755968 1148098 ~ 1153043 (+)
LOC103025599 NA coding downstream 999281 1391411 ~ 1412738 (+)
G181811 NA non-coding upstream 58369 332580 ~ 333245 (+)
G181802 NA non-coding upstream 108810 282369 ~ 282804 (+)
G181800 NA non-coding upstream 111824 279565 ~ 279790 (+)
G181798 NA non-coding upstream 117781 271554 ~ 273833 (+)
G181797 NA non-coding upstream 122357 268702 ~ 269257 (+)
G181816 NA non-coding downstream 40409 432539 ~ 433567 (+)
G181820 NA non-coding downstream 52951 445081 ~ 445298 (+)
G181821 NA non-coding downstream 100468 492598 ~ 500981 (+)
G181927 NA non-coding downstream 237777 629907 ~ 663519 (+)
G181934 NA non-coding downstream 283789 675919 ~ 676207 (+)
LOC111195149 NA other upstream 1448 289010 ~ 390166 (+)
LOC111195150 NA other upstream 85302 300095 ~ 306312 (+)
G181801 NA other upstream 105333 282076 ~ 286281 (+)
G181799 NA other upstream 113441 276671 ~ 278173 (+)
G181779 cd027,LOC108413410 other upstream 191618 191957 ~ 199996 (+)
LOC103029952 fgf20,fgf20a,LOC108412830,LOC103364653,LOC108432889,LOC107747399,LOC107721420,LOC107554387,LOC107702330,LOC107657011 other downstream 2065434 2457564 ~ 2460672 (+)
LOC111195173 NA other downstream 2133553 2525683 ~ 2569294 (+)
G182356 NA other downstream 2864237 3256367 ~ 3258850 (+)
G182361 NA other downstream 2895808 3287938 ~ 3290258 (+)
G182577 pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 other downstream 3977787 4369917 ~ 4431946 (+)

Expression


Co-expression Network