G181846


Basic Information

Item Value
gene id G181846
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 92965 ~ 94589 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246265
gggtggagctaaactgctgtaggcagAATGGGTGGAGCCTTCTAGTGGGCGGGGTTCAAACCCAATGTTAAATGCACCActgtctgactttacatctaaacttataataaaaaaaaatacaatattgccAAACAAATTGCAATACGATTTTATATTGATATAGTGTTTGATGGAATTGTGATGGTGCTTGATGATGTAAGCAGGTGCGTGTTCATGACTGTACCATGATTGGTTAATGATGTCAggtgtgttacagtaacagcaGCAGGTGAAGAGAGAAGAACGTTGTTTAGTGGATTTTACACACCTTCACTCCATCCGTCTTCTTGTTCAGCAAACTCTTGGCTGCTGTTGTgcccaacaaacaaacaaacaaacaaacaaacaacaagcaAAAACAAGTAAATATCTTCACACTCGTCAGTAACTCATGAGCTGTTCTGCATGCTGCAGGCAGGTTGGTTGGAGTAGGAAGGTTATACCTAAAGGAGCAGCTCTAGCAGTAGAGACACATCCAGACATGAACACACACTTAATGCAGAAATAATGCAGTCGTTTGCAGATAAAGAGCCTAAAACACACCCCATGCAGCACAAACACCCCCCCAGTCTTACTGTGTAACATCACTACAGCAATTACCACCCCTCCCTTCTCCAGGGGGCGACAGAGTGCAGGTCGGTGCAGCCTTCCGCTACTAggctctacttcactctacctctctttacctcaatCCACCTTCAGTCTACCTCGCGGTCCTTTACTCTCTCGAACTCAACAActcactgcctcactctacctcactttacattaCTCTATTCCACTCTACTTCACGTTTCTTTGGTGTATCTTCTTCCTCACTCTACATGAGTCTACCTCAGTCTTGCTCTACCTCAATTCACCTCACTCTGCATTagtttgcctcactctacctcgctttacctcactctgcattactctactttactctgcatgactctaccacactctgcattactctactttactctccatgactctacctcaATCTTGCTCTACCTCCATtcacctcactctgccttagtttgcctcactctacctcgctttacctcactctgcattactctactttactctccatgactctacctcactctgcattACTCCACTTTACTCTACATGACTCTAACTCAATCTTGCTCTACCTCCATtcacctcactct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246265 True 1199 lncRNA 0.44 3 92965 94589

Neighbor

gene id symbol gene type direction distance location
LOC111195164 NA coding downstream 57452 28644 ~ 35513 (-)
LOC103030254 LOC108413195 coding downstream 81764 8 ~ 11201 (-)
LOC103030885 LOC107692594,LOC107702307 coding upstream 15175 109764 ~ 190741 (-)
LOC103027497 LOC108413410 coding upstream 97369 191958 ~ 199979 (-)
rps6kb2 rps6kb2,LOC108413157,LOC108260512,LOC103368287 coding upstream 113062 207651 ~ 231129 (-)
LOC111195168 NA coding upstream 170371 264960 ~ 270360 (-)
ctnna2 ctnna2 coding upstream 858410 952999 ~ 1099800 (-)
G181853 NA non-coding upstream 126153 220742 ~ 262756 (-)
G181858 NA non-coding upstream 147097 241686 ~ 242173 (-)
LOC111195159 NA non-coding upstream 228042 322631 ~ 323782 (-)
G181888 NA non-coding upstream 300387 394976 ~ 395203 (-)
G181890 NA non-coding upstream 315637 410226 ~ 410543 (-)
LOC103026712 NA other downstream 44671 45736 ~ 48294 (-)
cisd2 cisd2 other upstream 399601 494190 ~ 508064 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other upstream 1490906 1585495 ~ 1712137 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other upstream 3300530 3395119 ~ 3454586 (-)
G182501 NA other upstream 3453044 3547633 ~ 3550413 (-)
LOC103027068 NA other upstream 5012447 5107036 ~ 5109098 (-)

Expression


Co-expression Network