G181858


Basic Information

Item Value
gene id G181858
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 241686 ~ 242173 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246277
actaccagatcaggaaaatctctcactatctttaataaactcctgaagacagagctcttcaaagagcacttactctcctaacacctctaactaactaccttctactaccagatcaggagaatctctcactatctttaataataaactcctgaagacagagctcttcaaagagcacttactctcctaacacctctaacacactaactacttctaacctcatttccttcttcccctccttcactcctctatcccattatttccctttgacctcctttaggccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246277 True 282 lncRNA 0.41 2 241686 242173

Neighbor

gene id symbol gene type direction distance location
rps6kb2 rps6kb2,LOC108413157,LOC108260512,LOC103368287 coding downstream 10557 207651 ~ 231129 (-)
LOC103027497 LOC108413410 coding downstream 41707 191958 ~ 199979 (-)
LOC103030885 LOC107692594,LOC107702307 coding downstream 50945 109764 ~ 190741 (-)
LOC111195164 NA coding downstream 206173 28644 ~ 35513 (-)
LOC103030254 LOC108413195 coding downstream 230485 8 ~ 11201 (-)
LOC111195168 NA coding upstream 22787 264960 ~ 270360 (-)
ctnna2 ctnna2 coding upstream 710826 952999 ~ 1099800 (-)
LOC103026423 ppp2r2ca,LOC103026423,LOC107692591,LOC107563918,LOC107742501,LOC108413194,LOC107562984 coding upstream 1137320 1379493 ~ 1390551 (-)
LOC103024763 LOC108434311,LOC108434344 coding upstream 1171896 1414069 ~ 1421243 (-)
LOC103025290 LOC108434344,LOC108434311 coding upstream 1180866 1423039 ~ 1438417 (-)
G181846 NA non-coding downstream 147097 92965 ~ 94589 (-)
LOC111195159 NA non-coding upstream 80458 322631 ~ 323782 (-)
G181888 NA non-coding upstream 152803 394976 ~ 395203 (-)
G181890 NA non-coding upstream 168053 410226 ~ 410543 (-)
G181891 NA non-coding upstream 171279 413452 ~ 413862 (-)
G181893 NA non-coding upstream 183264 425437 ~ 425995 (-)
LOC103026712 NA other downstream 193392 45736 ~ 48294 (-)
cisd2 cisd2 other upstream 252017 494190 ~ 508064 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other upstream 1343322 1585495 ~ 1712137 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other upstream 3152946 3395119 ~ 3454586 (-)
G182501 NA other upstream 3305460 3547633 ~ 3550413 (-)
LOC103027068 NA other upstream 4864863 5107036 ~ 5109098 (-)

Expression


Co-expression Network