G181914


Basic Information

Item Value
gene id G181914
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 542169 ~ 542440 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246347
gaggtattttagaaatagaatgaaagttggcccgctgttaagcaggtttttataatgtgagattcaaagtttgaacgctaggtgtcagaaacgggccaaagagtctaaaagcggagagagtgcacatttctagcgcagaaaaacgggccaaagagtctaaaagcggagagagtgcgcatttctagcgcagaaaaacgggccaaagagtctaaaagcggagagagtgcgcatttctagcgcagaaaaacgggccaaagagtctaaaagcggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246347 True 272 lncRNA 0.46 1 542169 542440

Neighbor

gene id symbol gene type direction distance location
LOC111195168 NA coding downstream 271809 264960 ~ 270360 (-)
rps6kb2 rps6kb2,LOC108413157,LOC108260512,LOC103368287 coding downstream 311040 207651 ~ 231129 (-)
LOC103027497 LOC108413410 coding downstream 342190 191958 ~ 199979 (-)
LOC103030885 LOC107692594,LOC107702307 coding downstream 351428 109764 ~ 190741 (-)
LOC111195164 NA coding downstream 506656 28644 ~ 35513 (-)
ctnna2 ctnna2 coding upstream 410559 952999 ~ 1099800 (-)
LOC103026423 ppp2r2ca,LOC103026423,LOC107692591,LOC107563918,LOC107742501,LOC108413194,LOC107562984 coding upstream 837053 1379493 ~ 1390551 (-)
LOC103024763 LOC108434311,LOC108434344 coding upstream 871629 1414069 ~ 1421243 (-)
LOC103025290 LOC108434344,LOC108434311 coding upstream 880599 1423039 ~ 1438417 (-)
trnai-aau_12 NA coding upstream 985586 1528026 ~ 1528099 (-)
G181902 NA non-coding downstream 1975 484426 ~ 540194 (-)
G181896 NA non-coding downstream 109030 431189 ~ 433139 (-)
G181895 NA non-coding downstream 111525 429950 ~ 430644 (-)
G181894 LOC108411976 non-coding downstream 112635 426062 ~ 429534 (-)
G181893 NA non-coding downstream 116174 425437 ~ 425995 (-)
G181915 NA non-coding upstream 2480 544920 ~ 545284 (-)
G181921 NA non-coding upstream 16500 558940 ~ 564921 (-)
G181923 NA non-coding upstream 22667 565107 ~ 565359 (-)
G181930 NA non-coding upstream 87478 629918 ~ 663234 (-)
G181932 NA non-coding upstream 115226 657666 ~ 658128 (-)
cisd2 cisd2 other downstream 34105 494190 ~ 508064 (-)
LOC103026712 NA other downstream 493875 45736 ~ 48294 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other upstream 1043055 1585495 ~ 1712137 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other upstream 2852679 3395119 ~ 3454586 (-)
G182501 NA other upstream 3005193 3547633 ~ 3550413 (-)
LOC103027068 NA other upstream 4564596 5107036 ~ 5109098 (-)
G182810 saraf other upstream 4634936 5177376 ~ 5213151 (-)

Expression


Co-expression Network