G181923


Basic Information

Item Value
gene id G181923
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 565107 ~ 565359 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246358
atcgcctacaaggtgatacagaacagctccttcctacctgcactcactcctgaagacttacgctacctcccggccgctgcgctcctccaatgaacgtcgcctcgctttgccaaacactcacacaaagcaatccagactgttctcatacagagttccccaatggtggaacaaactaccttccactaccagatcaggagaatctctcactatctttaataaactcctgaagacagagctcttcaaagagcactta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246358 True 253 lncRNA 0.49 1 565107 565359

Neighbor

gene id symbol gene type direction distance location
LOC111195168 NA coding downstream 294747 264960 ~ 270360 (-)
rps6kb2 rps6kb2,LOC108413157,LOC108260512,LOC103368287 coding downstream 333978 207651 ~ 231129 (-)
LOC103027497 LOC108413410 coding downstream 365128 191958 ~ 199979 (-)
LOC103030885 LOC107692594,LOC107702307 coding downstream 374366 109764 ~ 190741 (-)
LOC111195164 NA coding downstream 529594 28644 ~ 35513 (-)
ctnna2 ctnna2 coding upstream 387640 952999 ~ 1099800 (-)
LOC103026423 ppp2r2ca,LOC103026423,LOC107692591,LOC107563918,LOC107742501,LOC108413194,LOC107562984 coding upstream 814134 1379493 ~ 1390551 (-)
LOC103024763 LOC108434311,LOC108434344 coding upstream 848710 1414069 ~ 1421243 (-)
LOC103025290 LOC108434344,LOC108434311 coding upstream 857680 1423039 ~ 1438417 (-)
trnai-aau_12 NA coding upstream 962667 1528026 ~ 1528099 (-)
G181921 NA non-coding downstream 186 558940 ~ 564921 (-)
G181915 NA non-coding downstream 19823 544920 ~ 545284 (-)
G181914 NA non-coding downstream 22667 542169 ~ 542440 (-)
G181902 NA non-coding downstream 24913 484426 ~ 540194 (-)
G181896 NA non-coding downstream 131968 431189 ~ 433139 (-)
G181930 NA non-coding upstream 64559 629918 ~ 663234 (-)
G181932 NA non-coding upstream 92307 657666 ~ 658128 (-)
G182038 NA non-coding upstream 352922 918281 ~ 924087 (-)
G182044 NA non-coding upstream 398911 964270 ~ 965113 (-)
G182045 NA non-coding upstream 402167 967526 ~ 968264 (-)
cisd2 cisd2 other downstream 57043 494190 ~ 508064 (-)
LOC103026712 NA other downstream 516813 45736 ~ 48294 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other upstream 1020136 1585495 ~ 1712137 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other upstream 2829760 3395119 ~ 3454586 (-)
G182501 NA other upstream 2982274 3547633 ~ 3550413 (-)
LOC103027068 NA other upstream 4541677 5107036 ~ 5109098 (-)
G182810 saraf other upstream 4612017 5177376 ~ 5213151 (-)

Expression


Co-expression Network