G181930


Basic Information

Item Value
gene id G181930
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 629918 ~ 663234 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246365
cttggcatcatgttctcctcctccaccagtcttacacactgcttttggataactttatgctgctttactcctggtgtaaaaattcaagcagttcagtttggtggtttgatggcttgtgatcatccatcttcctcttgattatattccagaggttttcaatttggtaaaatcaaagaaactcatcatttttaagtgctctcttgttttttt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246365 True 210 lncRNA 0.37 2 629918 663234

Neighbor

gene id symbol gene type direction distance location
LOC111195168 NA coding downstream 359558 264960 ~ 270360 (-)
rps6kb2 rps6kb2,LOC108413157,LOC108260512,LOC103368287 coding downstream 398789 207651 ~ 231129 (-)
LOC103027497 LOC108413410 coding downstream 429939 191958 ~ 199979 (-)
LOC103030885 LOC107692594,LOC107702307 coding downstream 439177 109764 ~ 190741 (-)
LOC111195164 NA coding downstream 594405 28644 ~ 35513 (-)
ctnna2 ctnna2 coding upstream 289765 952999 ~ 1099800 (-)
LOC103026423 ppp2r2ca,LOC103026423,LOC107692591,LOC107563918,LOC107742501,LOC108413194,LOC107562984 coding upstream 716259 1379493 ~ 1390551 (-)
LOC103024763 LOC108434311,LOC108434344 coding upstream 750835 1414069 ~ 1421243 (-)
LOC103025290 LOC108434344,LOC108434311 coding upstream 759805 1423039 ~ 1438417 (-)
trnai-aau_12 NA coding upstream 864792 1528026 ~ 1528099 (-)
G181923 NA non-coding downstream 64559 565107 ~ 565359 (-)
G181921 NA non-coding downstream 64997 558940 ~ 564921 (-)
G181915 NA non-coding downstream 84634 544920 ~ 545284 (-)
G181914 NA non-coding downstream 87478 542169 ~ 542440 (-)
G181902 NA non-coding downstream 89724 484426 ~ 540194 (-)
G182038 NA non-coding upstream 255047 918281 ~ 924087 (-)
G182044 NA non-coding upstream 301036 964270 ~ 965113 (-)
G182045 NA non-coding upstream 304292 967526 ~ 968264 (-)
G182096 NA non-coding upstream 554381 1217615 ~ 1239567 (-)
G182115 NA non-coding upstream 596252 1259486 ~ 1260331 (-)
cisd2 cisd2 other downstream 121854 494190 ~ 508064 (-)
LOC103026712 NA other downstream 581624 45736 ~ 48294 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other upstream 922261 1585495 ~ 1712137 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other upstream 2731885 3395119 ~ 3454586 (-)
G182501 NA other upstream 2884399 3547633 ~ 3550413 (-)
LOC103027068 NA other upstream 4443802 5107036 ~ 5109098 (-)
G182810 saraf other upstream 4514142 5177376 ~ 5213151 (-)

Expression


Co-expression Network