G182045


Basic Information

Item Value
gene id G182045
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 967526 ~ 968264 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246522
atatatatatatatatatgagacaAGACCAGTTGTATATATGAGACAAGAAAGGACATACATAACAAATCTATATATGTTAGACTAAATTTACATATGAGACCAGACATAAGACCTTATGTACATACCAGATGAGAAAGATAAGATGTACTTCTGCCATGTAAAAGAACAAACgcacataaaaaaatgagaccaagTTAAACAGGAGACAAGAACAGATGTACAAGACCTTATTTACAAGATCAGACTAGCTGTACCCGAGATTAGACCAATATGTACCTTTAATTAGACCAGATGTACCAAGATAACAGGAAACAAGAACAGACGAAACCTGATGTACCCGAGATTAGACCAGATGTACAAGAACAAATTCACAAAATATGAAACCAAGACAACAGGAGACAAGACCAGATGCAAGAGACCTGATGTACGAGAGGACACCAGATGTACCTGAGATTAGACCAGATGCAAGAGACCTGATGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246522 True 483 lncRNA 0.36 2 967526 968264

Neighbor

gene id symbol gene type direction distance location
LOC111195168 NA coding downstream 697166 264960 ~ 270360 (-)
rps6kb2 rps6kb2,LOC108413157,LOC108260512,LOC103368287 coding downstream 736397 207651 ~ 231129 (-)
LOC103027497 LOC108413410 coding downstream 767547 191958 ~ 199979 (-)
LOC103030885 LOC107692594,LOC107702307 coding downstream 776785 109764 ~ 190741 (-)
LOC111195164 NA coding downstream 932013 28644 ~ 35513 (-)
LOC103026423 ppp2r2ca,LOC103026423,LOC107692591,LOC107563918,LOC107742501,LOC108413194,LOC107562984 coding upstream 411229 1379493 ~ 1390551 (-)
LOC103024763 LOC108434311,LOC108434344 coding upstream 445805 1414069 ~ 1421243 (-)
LOC103025290 LOC108434344,LOC108434311 coding upstream 454775 1423039 ~ 1438417 (-)
trnai-aau_12 NA coding upstream 559762 1528026 ~ 1528099 (-)
LOC103028260 tusc3,LOC108413602 coding upstream 1598099 2566363 ~ 2661226 (-)
G182044 NA non-coding downstream 2413 964270 ~ 965113 (-)
G182038 NA non-coding downstream 43439 918281 ~ 924087 (-)
G181930 NA non-coding downstream 304292 629918 ~ 663234 (-)
G181932 NA non-coding downstream 309398 657666 ~ 658128 (-)
G181923 NA non-coding downstream 402167 565107 ~ 565359 (-)
G182096 NA non-coding upstream 249351 1217615 ~ 1239567 (-)
G182115 NA non-coding upstream 291222 1259486 ~ 1260331 (-)
G182144 NA non-coding upstream 362728 1330992 ~ 1375077 (-)
G182158 LOC108413195 non-coding upstream 398146 1366410 ~ 1373731 (-)
G182137 NA non-coding upstream 408713 1376977 ~ 1378219 (-)
cisd2 cisd2 other downstream 459462 494190 ~ 508064 (-)
LOC103026712 NA other downstream 919232 45736 ~ 48294 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other upstream 617231 1585495 ~ 1712137 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other upstream 2426855 3395119 ~ 3454586 (-)
G182501 NA other upstream 2579369 3547633 ~ 3550413 (-)
LOC103027068 NA other upstream 4138772 5107036 ~ 5109098 (-)
G182810 saraf other upstream 4209112 5177376 ~ 5213151 (-)

Expression


Co-expression Network