Gene
RNA
| Item | Value |
|---|---|
| gene id | G69777 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 1809924 ~ 1810129 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU79570 | True | 206 | lncRNA | 0.44 | 1 | 1809924 | 1810129 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_01677949_01691893 | POLR1B | coding | downstream | 117888 | 1677904 ~ 1692036 (-) |
| CI01000012_01601665_01604244 | CYP1B1 | coding | downstream | 205571 | 1601654 ~ 1604353 (-) |
| CI01000012_01489297_01490202 | CDC42EP3 | coding | downstream | 319611 | 1488830 ~ 1490313 (-) |
| CI01000012_01256938_01257273 | PRKCE | coding | downstream | 552651 | 1255717 ~ 1257273 (-) |
| CI01000012_01240945_01242653 | SOCS5, SOCS5B | coding | downstream | 567271 | 1240517 ~ 1242653 (-) |
| CI01000012_02239088_02240850 | NA | coding | upstream | 428271 | 2238400 ~ 2240862 (-) |
| CI01000012_02251322_02337964 | PRKG1A, PRKG1, PRKG1B | coding | upstream | 441008 | 2251137 ~ 2339368 (-) |
| CI01000012_02357517_02361973 | NKX1-2, NKX1.2LA | coding | upstream | 546995 | 2357124 ~ 2361973 (-) |
| CI01000012_02381631_02386668 | NA | coding | upstream | 571219 | 2381348 ~ 2386668 (-) |
| CI01000012_02395816_02404347 | HPS1 | coding | upstream | 585428 | 2395557 ~ 2404347 (-) |
| G69759 | NA | non-coding | downstream | 15661 | 1794031 ~ 1794263 (-) |
| G69752 | NA | non-coding | downstream | 23914 | 1770260 ~ 1786010 (-) |
| G69726 | NA | non-coding | downstream | 89659 | 1720005 ~ 1720265 (-) |
| G69722 | NA | non-coding | downstream | 152297 | 1657399 ~ 1657627 (-) |
| G69720 | NA | non-coding | downstream | 154145 | 1655480 ~ 1655779 (-) |
| G69778 | NA | non-coding | upstream | 6893 | 1817022 ~ 1817306 (-) |
| G69779 | NA | non-coding | upstream | 7904 | 1818033 ~ 1818488 (-) |
| G69781 | NA | non-coding | upstream | 18866 | 1828995 ~ 1829224 (-) |
| G69800 | NA | non-coding | upstream | 51522 | 1861651 ~ 1861988 (-) |
| G70439 | NA | non-coding | upstream | 217418 | 2027547 ~ 2035108 (-) |
| G69562 | NA | other | downstream | 433626 | 1332075 ~ 1376298 (-) |
| CI01000012_01139864_01192154 | TTC7A | other | downstream | 658726 | 1135676 ~ 1192154 (-) |
| G69332 | NA | other | downstream | 1034045 | 775364 ~ 775879 (-) |
| G69277 | NA | other | downstream | 1079459 | 729920 ~ 730465 (-) |
| G69161 | NA | other | downstream | 1221909 | 587604 ~ 588015 (-) |
| G70774 | NA | other | upstream | 1056379 | 2866508 ~ 2866892 (-) |
| G71898 | NA | other | upstream | 2723401 | 4533530 ~ 4534672 (-) |
| G72068 | NA | other | upstream | 2966091 | 4776220 ~ 4780132 (-) |
| G72204 | NA | other | upstream | 3483644 | 5293773 ~ 5302206 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | upstream | 3553513 | 5413369 ~ 5416780 (-) |
