G182168


Basic Information

Item Value
gene id G182168
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 1420794 ~ 1517315 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246680
tTGCTATAAAACCCACTGCATTTCAAGGGTTGCCAAGTTGTCCTATCTGTCGTCTTTAAGaggataaaataaatacacagcttTAACACATGGGCCAGTTTCTCCATCCGAGTGAGAAAACCGTAGGCTACATCACATCGCTCCATAATtcttatatatcttaattaGAGATTAGCCTACACAAATAAGACAGATCATATGACCTATGGCCCATGACCTGTATTTCCTTTAGgttatttaaaacagatctgggaTACTAAAACATAATTTGAGAGCATGCCAAGCCCCATTCACAACAGCCAAACGTTGCAGAAGTATCGTTACGCAGATCACAGGGTTTATGAATAAAAAGACACTGGTATGAAATAGTCATTTCTGCATATATCCATCTGTTTACCATCTGCAATGGTAGAACAAACAAgcaaagaaaatggaaaatgttgCTCTGAGCGTTGCATACGGAACACAAGCACACAACAACCTCCTTCCAAAGGTGCAATCAATCATTCGTAAGGCACGACACAGCAATGTGTATGATTTACAGCTGTCTGGAacaacagaaaagaaagaaaaacaaaaacaaaaactaagaaaCTAAGACAAACAACCTTAacgtttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246680 True 625 lncRNA 0.38 2 1420794 1517315

Neighbor

gene id symbol gene type direction distance location
LOC103026423 ppp2r2ca,LOC103026423,LOC107692591,LOC107563918,LOC107742501,LOC108413194,LOC107562984 coding downstream 30243 1379493 ~ 1390551 (-)
ctnna2 ctnna2 coding downstream 320994 952999 ~ 1099800 (-)
LOC111195168 NA coding downstream 1150434 264960 ~ 270360 (-)
rps6kb2 rps6kb2,LOC108413157,LOC108260512,LOC103368287 coding downstream 1189665 207651 ~ 231129 (-)
LOC103027497 LOC108413410 coding downstream 1220815 191958 ~ 199979 (-)
trnai-aau_12 NA coding upstream 10711 1528026 ~ 1528099 (-)
LOC103028260 tusc3,LOC108413602 coding upstream 1049048 2566363 ~ 2661226 (-)
tlr3 NA coding upstream 1630846 3148161 ~ 3157508 (-)
ankrd37 ankrd37 coding upstream 1784105 3301420 ~ 3306306 (-)
LOC103040979 slc25a4,LOC107656452,LOC107562743 coding upstream 1820516 3337831 ~ 3341350 (-)
G182137 NA non-coding downstream 42575 1376977 ~ 1378219 (-)
G182144 NA non-coding downstream 45717 1330992 ~ 1375077 (-)
G182158 LOC108413195 non-coding downstream 47063 1366410 ~ 1373731 (-)
G182115 NA non-coding downstream 160463 1259486 ~ 1260331 (-)
G182096 NA non-coding downstream 181227 1217615 ~ 1239567 (-)
G182206 exosc9 non-coding upstream 7160 1524475 ~ 1527380 (-)
G182215 NA non-coding upstream 29906 1547221 ~ 1549039 (-)
G182212 NA non-coding upstream 41460 1558775 ~ 1565978 (-)
G182222 NA non-coding upstream 54105 1571420 ~ 1590782 (-)
G182227 NA non-coding upstream 219449 1736764 ~ 1737111 (-)
cisd2 cisd2 other downstream 912730 494190 ~ 508064 (-)
LOC103026712 NA other downstream 1372500 45736 ~ 48294 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other upstream 68180 1585495 ~ 1712137 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other upstream 1877804 3395119 ~ 3454586 (-)
G182501 NA other upstream 2030318 3547633 ~ 3550413 (-)
LOC103027068 NA other upstream 3589721 5107036 ~ 5109098 (-)
G182810 saraf other upstream 3660061 5177376 ~ 5213151 (-)

Expression


Co-expression Network