G182315


Basic Information

Item Value
gene id G182315
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 2794915 ~ 2796222 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU246854
tgagacagatgtagagctaggtagagtgagacagaggtagagctaggtagagtgagacagaggtagagctaggtagagtgagacagaggtagagctaggtagagtgagacagatgtagagctaggtagagtgagacagaggtagagctaggtagagtgagacaggtagagctaggtagagtgagacagatgtagagctaggtagagtgagacagaggtagagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU246854 True 224 lncRNA 0.49 2 2794915 2796222

Neighbor

gene id symbol gene type direction distance location
frg1 frg1,LOC107721419,LOC107702291 coding upstream 672334 2113783 ~ 2122581 (+)
LOC111195171 NA coding upstream 1212081 1579243 ~ 1582834 (+)
LOC103022979 NA coding upstream 1219859 1571942 ~ 1575056 (+)
LOC111195172 NA coding upstream 1224244 1566940 ~ 1570671 (+)
LOC103023290 ptpn9b,LOC108434348,LOC107746013,LOC107702357,LOC107591531,LOC107754144,LOC107551593 coding upstream 1250554 1529116 ~ 1544361 (+)
LOC103022435 LOC108441326 coding downstream 215449 3011671 ~ 3147270 (+)
LOC103043954 LOC108413760 coding downstream 381410 3177632 ~ 3266112 (+)
LOC103042722 pdli3,LOC103042722,LOC108415769 coding downstream 478664 3274886 ~ 3284974 (+)
ufsp2 ufsp2,LOC107579280 coding downstream 494562 3290784 ~ 3301449 (+)
cfap97 NA coding downstream 527539 3323761 ~ 3336839 (+)
G182268 NA non-coding upstream 171148 2623342 ~ 2623767 (+)
LOC111195152 NA non-coding upstream 278245 2461778 ~ 2516670 (+)
G182247 NA non-coding upstream 342480 2450497 ~ 2452435 (+)
G182232 NA non-coding upstream 970849 1823845 ~ 1824066 (+)
G182229 NA non-coding upstream 1033739 1760856 ~ 1761176 (+)
G182316 NA non-coding downstream 47905 2844127 ~ 2844371 (+)
G182287 NA non-coding downstream 81468 2877690 ~ 2936657 (+)
G182318 NA non-coding downstream 90293 2886515 ~ 2887312 (+)
G182334 NA non-coding downstream 182831 2979053 ~ 2979366 (+)
G182343 NA non-coding downstream 318665 3114887 ~ 3115698 (+)
LOC111195173 NA other upstream 225621 2525683 ~ 2569294 (+)
LOC103029952 fgf20,fgf20a,LOC108412830,LOC103364653,LOC108432889,LOC107747399,LOC107721420,LOC107554387,LOC107702330,LOC107657011 other upstream 334243 2457564 ~ 2460672 (+)
G181818 NA other upstream 2402785 391614 ~ 392130 (+)
LOC111195149 NA other upstream 2404749 289010 ~ 390166 (+)
G182356 NA other downstream 460145 3256367 ~ 3258850 (+)
G182361 NA other downstream 491716 3287938 ~ 3290258 (+)
G182577 pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 other downstream 1573695 4369917 ~ 4431946 (+)
LOC103029349 NA other downstream 2139361 4935583 ~ 4941134 (+)
G182790 NA other downstream 2630645 5426867 ~ 5427255 (+)

Expression


Co-expression Network