Gene
RNA
| Item | Value |
|---|---|
| gene id | G69781 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 1828995 ~ 1829224 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU79574 | True | 230 | lncRNA | 0.46 | 1 | 1828995 | 1829224 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_01677949_01691893 | POLR1B | coding | downstream | 136959 | 1677904 ~ 1692036 (-) |
| CI01000012_01601665_01604244 | CYP1B1 | coding | downstream | 224642 | 1601654 ~ 1604353 (-) |
| CI01000012_01489297_01490202 | CDC42EP3 | coding | downstream | 338682 | 1488830 ~ 1490313 (-) |
| CI01000012_01256938_01257273 | PRKCE | coding | downstream | 571722 | 1255717 ~ 1257273 (-) |
| CI01000012_01240945_01242653 | SOCS5, SOCS5B | coding | downstream | 586342 | 1240517 ~ 1242653 (-) |
| CI01000012_02239088_02240850 | NA | coding | upstream | 409176 | 2238400 ~ 2240862 (-) |
| CI01000012_02251322_02337964 | PRKG1A, PRKG1, PRKG1B | coding | upstream | 421913 | 2251137 ~ 2339368 (-) |
| CI01000012_02357517_02361973 | NKX1-2, NKX1.2LA | coding | upstream | 527900 | 2357124 ~ 2361973 (-) |
| CI01000012_02381631_02386668 | NA | coding | upstream | 552124 | 2381348 ~ 2386668 (-) |
| CI01000012_02395816_02404347 | HPS1 | coding | upstream | 566333 | 2395557 ~ 2404347 (-) |
| G69779 | NA | non-coding | downstream | 10507 | 1818033 ~ 1818488 (-) |
| G69778 | NA | non-coding | downstream | 11689 | 1817022 ~ 1817306 (-) |
| G69777 | NA | non-coding | downstream | 18866 | 1809924 ~ 1810129 (-) |
| G69759 | NA | non-coding | downstream | 34732 | 1794031 ~ 1794263 (-) |
| G69752 | NA | non-coding | downstream | 42985 | 1770260 ~ 1786010 (-) |
| G69800 | NA | non-coding | upstream | 32427 | 1861651 ~ 1861988 (-) |
| G70439 | NA | non-coding | upstream | 198323 | 2027547 ~ 2035108 (-) |
| G70462 | NA | non-coding | upstream | 251300 | 2080524 ~ 2082217 (-) |
| G70469 | NA | non-coding | upstream | 263646 | 2092870 ~ 2095569 (-) |
| G70477 | NA | non-coding | upstream | 286007 | 2115231 ~ 2115727 (-) |
| G69562 | NA | other | downstream | 452697 | 1332075 ~ 1376298 (-) |
| CI01000012_01139864_01192154 | TTC7A | other | downstream | 677797 | 1135676 ~ 1192154 (-) |
| G69332 | NA | other | downstream | 1053116 | 775364 ~ 775879 (-) |
| G69277 | NA | other | downstream | 1098530 | 729920 ~ 730465 (-) |
| G69161 | NA | other | downstream | 1240980 | 587604 ~ 588015 (-) |
| G70774 | NA | other | upstream | 1037284 | 2866508 ~ 2866892 (-) |
| G71898 | NA | other | upstream | 2704306 | 4533530 ~ 4534672 (-) |
| G72068 | NA | other | upstream | 2946996 | 4776220 ~ 4780132 (-) |
| G72204 | NA | other | upstream | 3464549 | 5293773 ~ 5302206 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | upstream | 3534418 | 5413369 ~ 5416780 (-) |
