Gene
RNA
| Item | Value |
|---|---|
| gene id | G70462 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 2080524 ~ 2082217 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: adhesion G protein-coupled receptor A1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU80362 | True | 239 | lncRNA | 0.47 | 2 | 2080524 | 2082217 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_01677949_01691893 | POLR1B | coding | downstream | 388488 | 1677904 ~ 1692036 (-) |
| CI01000012_01601665_01604244 | CYP1B1 | coding | downstream | 476171 | 1601654 ~ 1604353 (-) |
| CI01000012_01489297_01490202 | CDC42EP3 | coding | downstream | 590211 | 1488830 ~ 1490313 (-) |
| CI01000012_01256938_01257273 | PRKCE | coding | downstream | 823251 | 1255717 ~ 1257273 (-) |
| CI01000012_01240945_01242653 | SOCS5, SOCS5B | coding | downstream | 837871 | 1240517 ~ 1242653 (-) |
| CI01000012_02239088_02240850 | NA | coding | upstream | 156183 | 2238400 ~ 2240862 (-) |
| CI01000012_02251322_02337964 | PRKG1A, PRKG1, PRKG1B | coding | upstream | 168920 | 2251137 ~ 2339368 (-) |
| CI01000012_02357517_02361973 | NKX1-2, NKX1.2LA | coding | upstream | 274907 | 2357124 ~ 2361973 (-) |
| CI01000012_02381631_02386668 | NA | coding | upstream | 299131 | 2381348 ~ 2386668 (-) |
| CI01000012_02395816_02404347 | HPS1 | coding | upstream | 313340 | 2395557 ~ 2404347 (-) |
| G70439 | NA | non-coding | downstream | 45416 | 2027547 ~ 2035108 (-) |
| G69800 | NA | non-coding | downstream | 218536 | 1861651 ~ 1861988 (-) |
| G69781 | NA | non-coding | downstream | 251300 | 1828995 ~ 1829224 (-) |
| G69779 | NA | non-coding | downstream | 262036 | 1818033 ~ 1818488 (-) |
| G69778 | NA | non-coding | downstream | 263218 | 1817022 ~ 1817306 (-) |
| G70469 | NA | non-coding | upstream | 10653 | 2092870 ~ 2095569 (-) |
| G70477 | NA | non-coding | upstream | 33014 | 2115231 ~ 2115727 (-) |
| G70522 | NA | non-coding | upstream | 90722 | 2172939 ~ 2173220 (-) |
| G70538 | NA | non-coding | upstream | 128125 | 2210342 ~ 2210634 (-) |
| G70543 | NA | non-coding | upstream | 149822 | 2232039 ~ 2232276 (-) |
| G69562 | NA | other | downstream | 704226 | 1332075 ~ 1376298 (-) |
| CI01000012_01139864_01192154 | TTC7A | other | downstream | 929326 | 1135676 ~ 1192154 (-) |
| G69332 | NA | other | downstream | 1304645 | 775364 ~ 775879 (-) |
| G69277 | NA | other | downstream | 1350059 | 729920 ~ 730465 (-) |
| G69161 | NA | other | downstream | 1492509 | 587604 ~ 588015 (-) |
| G70774 | NA | other | upstream | 784291 | 2866508 ~ 2866892 (-) |
| G71898 | NA | other | upstream | 2451313 | 4533530 ~ 4534672 (-) |
| G72068 | NA | other | upstream | 2694003 | 4776220 ~ 4780132 (-) |
| G72204 | NA | other | upstream | 3211556 | 5293773 ~ 5302206 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | upstream | 3281425 | 5413369 ~ 5416780 (-) |
