G183001 (pgm2)


Basic Information

Item Value
gene id G183001
gene name pgm2
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 6042688 ~ 6048474 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU247815
GCTTACTGCTTCCCCCGCTAGCTGTGTGCTCACGAGCATCAAAGCCAATCACCACTCCTCGCTCCTTCAGGTCTGTGAAACACTGCTCTAGATACCGACAGAAACCCTGTGTGGTCTGTATGATAGTCAGGTCGTTCATTCTAGACACTCCAGGTCCCATGGCAGCTCTCAGTCCCGCTGTTCCGAACTCCATCCGAGCACCGAAACATTTCTTCAGCTCGTCTATCGCACCGTTCTTCACCATCTCTCGAACGCAGGCTGCTGTCTTGGCGTTCCGGTCAAACTCCAACCACTGTCTGATGGCAGTGTCCAGCCCCGGGTCTCCGGTGGTCTCCGCGCCGTTCTCCATGCTGCTGGGCAGGTGTGGAGGTCTGAAAGTCTGGGGTAAAGGACGGGAAACCGGTAGCTCAGCCTCTCAGTCTCACGGTCTCTCAGTC

Function

symbol description
pgm2 Predicted to enable intramolecular transferase activity, phosphotransferases and magnesium ion binding activity. Predicted to act upstream of or within glucose metabolic process. Orthologous to human PGM2 (phosphoglucomutase 2).

NR:

description
PREDICTED: phosphoglucomutase-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247815 True 437 TUCP 0.57 3 6042688 6048474

Neighbor

gene id symbol gene type direction distance location
trnap-agg_6 NA coding upstream 197186 5845431 ~ 5845502 (+)
LOC111195263 LOC108425226 coding upstream 322220 5718040 ~ 5720468 (+)
LOC111195187 cyp4v8,LOC108415372,LOC107656409,LOC107754133,LOC107562739,LOC106602559 coding upstream 627707 5398879 ~ 5414981 (+)
LOC111195186 NA coding upstream 666624 5367516 ~ 5376064 (+)
clta clta,LOC107723183 coding upstream 679477 5348567 ~ 5363211 (+)
LOC103028415 NA coding downstream 53411 6101885 ~ 6125784 (+)
LOC111195264 NA coding downstream 502779 6551253 ~ 6564327 (+)
LOC111195195 NA coding downstream 562115 6610589 ~ 6618713 (+)
LOC111195266 NA coding downstream 592073 6640547 ~ 6642395 (+)
LOC103027465 chrnb2a,LOC108412405,LOC107656869,LOC107548317,LOC107562601,LOC107702400 coding downstream 656403 6704877 ~ 6732876 (+)
G182997 pgm2,LOC107746017,LOC107591526,LOC107551595,LOC107682618 non-coding upstream 8182 6034016 ~ 6034506 (+)
LOC111195191 NA non-coding upstream 169492 5860865 ~ 5873196 (+)
G182941 LOC107741621,LOC107559181,LOC107564376,LOC107559180,LOC108414272,LOC108414004 non-coding upstream 332348 5709652 ~ 5710340 (+)
G182911 NA non-coding upstream 483181 5543426 ~ 5559507 (+)
G182907 NA non-coding upstream 544322 5493842 ~ 5498366 (+)
G183032 NA non-coding downstream 106783 6155257 ~ 6155581 (+)
G183062 NA non-coding downstream 266189 6314663 ~ 6409548 (+)
G183065 NA non-coding downstream 297647 6346121 ~ 6359755 (+)
G183076 melk,LOC107750464 non-coding downstream 332287 6380761 ~ 6391264 (+)
G183078 melk,LOC107750464 non-coding downstream 347567 6396041 ~ 6403802 (+)
G182790 NA other upstream 615433 5426867 ~ 5427255 (+)
LOC103029349 NA other upstream 1101554 4935583 ~ 4941134 (+)
G182577 pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 other upstream 1610742 4369917 ~ 4431946 (+)
G182361 NA other upstream 2752430 3287938 ~ 3290258 (+)
G182356 NA other upstream 2783838 3256367 ~ 3258850 (+)
pax5 pax5 other downstream 202300 6250774 ~ 6367190 (+)
rnf38 rnf38,LOC107551561 other downstream 396789 6445263 ~ 6498192 (+)
LOC103036850 NA other downstream 474739 6523213 ~ 6664763 (+)
LOC103028013 LOC108410819,LOC107548356,LOC107655813,LOC107702399,LOC107709454,LOC107562618,LOC108260988 other downstream 849006 6897480 ~ 7009923 (+)
G183215 NA other downstream 1165997 7214471 ~ 7217139 (+)

Expression


Co-expression Network