Gene
RNA
| Item | Value |
|---|---|
| gene id | G70522 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 2172939 ~ 2173220 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU80432 | True | 282 | lncRNA | 0.37 | 1 | 2172939 | 2173220 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_01677949_01691893 | POLR1B | coding | downstream | 480903 | 1677904 ~ 1692036 (-) |
| CI01000012_01601665_01604244 | CYP1B1 | coding | downstream | 568586 | 1601654 ~ 1604353 (-) |
| CI01000012_01489297_01490202 | CDC42EP3 | coding | downstream | 682626 | 1488830 ~ 1490313 (-) |
| CI01000012_01256938_01257273 | PRKCE | coding | downstream | 915666 | 1255717 ~ 1257273 (-) |
| CI01000012_01240945_01242653 | SOCS5, SOCS5B | coding | downstream | 930286 | 1240517 ~ 1242653 (-) |
| CI01000012_02239088_02240850 | NA | coding | upstream | 65180 | 2238400 ~ 2240862 (-) |
| CI01000012_02251322_02337964 | PRKG1A, PRKG1, PRKG1B | coding | upstream | 77917 | 2251137 ~ 2339368 (-) |
| CI01000012_02357517_02361973 | NKX1-2, NKX1.2LA | coding | upstream | 183904 | 2357124 ~ 2361973 (-) |
| CI01000012_02381631_02386668 | NA | coding | upstream | 208128 | 2381348 ~ 2386668 (-) |
| CI01000012_02395816_02404347 | HPS1 | coding | upstream | 222337 | 2395557 ~ 2404347 (-) |
| G70477 | NA | non-coding | downstream | 57212 | 2115231 ~ 2115727 (-) |
| G70469 | NA | non-coding | downstream | 77370 | 2092870 ~ 2095569 (-) |
| G70462 | NA | non-coding | downstream | 90722 | 2080524 ~ 2082217 (-) |
| G70439 | NA | non-coding | downstream | 137831 | 2027547 ~ 2035108 (-) |
| G69800 | NA | non-coding | downstream | 310951 | 1861651 ~ 1861988 (-) |
| G70538 | NA | non-coding | upstream | 37122 | 2210342 ~ 2210634 (-) |
| G70543 | NA | non-coding | upstream | 58819 | 2232039 ~ 2232276 (-) |
| G70664 | NA | non-coding | upstream | 331486 | 2504706 ~ 2504932 (-) |
| G70687 | NA | non-coding | upstream | 412276 | 2585496 ~ 2586108 (-) |
| G70690 | NA | non-coding | upstream | 414240 | 2587460 ~ 2587689 (-) |
| G69562 | NA | other | downstream | 796641 | 1332075 ~ 1376298 (-) |
| CI01000012_01139864_01192154 | TTC7A | other | downstream | 1021741 | 1135676 ~ 1192154 (-) |
| G69332 | NA | other | downstream | 1397060 | 775364 ~ 775879 (-) |
| G69277 | NA | other | downstream | 1442474 | 729920 ~ 730465 (-) |
| G69161 | NA | other | downstream | 1584924 | 587604 ~ 588015 (-) |
| G70774 | NA | other | upstream | 693288 | 2866508 ~ 2866892 (-) |
| G71898 | NA | other | upstream | 2360310 | 4533530 ~ 4534672 (-) |
| G72068 | NA | other | upstream | 2603000 | 4776220 ~ 4780132 (-) |
| G72204 | NA | other | upstream | 3120553 | 5293773 ~ 5302206 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | upstream | 3190422 | 5413369 ~ 5416780 (-) |
