G183391


Basic Information

Item Value
gene id G183391
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 9305395 ~ 9306685 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU248457
tgtgcaatgtaaatatatattgttcattagtacagtgatgcagaatactgaatgtaccctttggctggttaaatggtacaaatctgtacttattgctgttagaaatgactttgtacttcagagggaacaaatctgaccccgtaaagaccaatattgtacctttgagggtacaattataaagagtgtaccttcgagtacaaaaaaagtactcatatcgtacctctgttttttagagtgtagggaG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248457 True 244 lncRNA 0.36 2 9305395 9306685

Neighbor

gene id symbol gene type direction distance location
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 coding upstream 121356 9090283 ~ 9184039 (+)
cpe cpe,LOC107745061,LOC107548348,LOC107591555 coding upstream 458981 8801144 ~ 8846414 (+)
msmo1 msmo1,LOC107750426,LOC107702386,LOC107655978 coding upstream 511488 8784880 ~ 8793907 (+)
klhl2 klhl2,LOC107655955,LOC107745059,LOC107591556,LOC107702385 coding upstream 526452 8752127 ~ 8778943 (+)
LOC103036243 LOC108439191 coding upstream 565532 8627354 ~ 8739863 (+)
LOC103047154 ndst3,LOC108439183,LOC108260488,LOC107591550,LOC107551574,LOC107702380,LOC107750457 coding downstream 161889 9468574 ~ 9650975 (+)
LOC111195203 LOC108411626 coding downstream 549127 9855812 ~ 9865765 (+)
LOC111195273 NA coding downstream 677927 9984612 ~ 9985691 (+)
LOC111195205 NA coding downstream 688924 9995609 ~ 9996842 (+)
LOC111195208 LOC107690133,LOC107745493,LOC107715185,LOC107581013,LOC107738483,LOC107756941,LOC107569589,LOC107740227,LOC108419634,LOC108417841 coding downstream 797169 10103854 ~ 10104501 (+)
G183389 NA non-coding upstream 17253 9283609 ~ 9288142 (+)
G183361 NA non-coding upstream 265646 9000855 ~ 9039749 (+)
G183312 NA non-coding upstream 562422 8702426 ~ 8742973 (+)
G183293 NA non-coding upstream 1805913 7480385 ~ 7499482 (+)
G183289 ncapd3 non-coding upstream 1846691 7433978 ~ 7458704 (+)
G183405 NA non-coding downstream 254025 9560710 ~ 9932597 (+)
G183406 NA non-coding downstream 261487 9568172 ~ 9570981 (+)
G183412 NA non-coding downstream 274388 9581073 ~ 9581376 (+)
G183395 NA non-coding downstream 347582 9654267 ~ 9657602 (+)
G183426 NA non-coding downstream 369406 9676091 ~ 9677003 (+)
G183387 NA other upstream 11692 9211334 ~ 9293703 (+)
tll1 tll1,LOC107548346,LOC107745060,LOC107591552 other upstream 321426 8870837 ~ 8983969 (+)
G183215 NA other upstream 2088256 7214471 ~ 7217139 (+)
LOC103028013 LOC108410819,LOC107548356,LOC107655813,LOC107702399,LOC107709454,LOC107562618,LOC108260988 other upstream 2295472 6897480 ~ 7009923 (+)
LOC103036850 NA other upstream 2640632 6523213 ~ 6664763 (+)
LOC111195202 NA other downstream 532251 9838936 ~ 9844659 (+)
LOC111195140 NA other downstream 758167 10064852 ~ 10072047 (+)
LOC111195207 LOC107375340,LOC106958509,LOC105896809,LOC107671222,LOC107690788 other downstream 791861 10098546 ~ 10101547 (+)
G183671 NA other downstream 803181 10109866 ~ 10110741 (+)
LOC111195212 LOC108414267,LOC106946373,LOC103130468,LOC102227983,LOC108269716,LOC108261415,LOC105936005,LOC107386469,LOC107577828,LOC107569598,LOC107677420 other downstream 838768 10145453 ~ 10171103 (+)

Expression


Co-expression Network