G183412


Basic Information

Item Value
gene id G183412
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 9581073 ~ 9581376 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU248486
agacagacataaagacacacagacagacaagatagagagagaaagaaagagacagagagacacagagacttACAAAaagacacagacagaaagagatagatagatagatagatagatagatagatagatagactcagactgacagagagacagacagaaagacagagccAGAGACAGTCACATAGACAGAGAGGTAGACATTAAAACACAAAGAGAAAGATACAAAGAGTGAGCACAGACAGACAAGATAGAGCGACAGacagaaaggtaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248486 True 272 lncRNA 0.40 2 9581073 9581376

Neighbor

gene id symbol gene type direction distance location
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 coding upstream 397034 9090283 ~ 9184039 (+)
cpe cpe,LOC107745061,LOC107548348,LOC107591555 coding upstream 734659 8801144 ~ 8846414 (+)
msmo1 msmo1,LOC107750426,LOC107702386,LOC107655978 coding upstream 787166 8784880 ~ 8793907 (+)
klhl2 klhl2,LOC107655955,LOC107745059,LOC107591556,LOC107702385 coding upstream 802130 8752127 ~ 8778943 (+)
LOC103036243 LOC108439191 coding upstream 841210 8627354 ~ 8739863 (+)
LOC111195203 LOC108411626 coding downstream 274436 9855812 ~ 9865765 (+)
LOC111195273 NA coding downstream 403236 9984612 ~ 9985691 (+)
LOC111195205 NA coding downstream 414233 9995609 ~ 9996842 (+)
LOC111195208 LOC107690133,LOC107745493,LOC107715185,LOC107581013,LOC107738483,LOC107756941,LOC107569589,LOC107740227,LOC108419634,LOC108417841 coding downstream 522478 10103854 ~ 10104501 (+)
LOC111195210 NA coding downstream 568562 10149938 ~ 10154831 (+)
G183406 NA non-coding upstream 10092 9568172 ~ 9570981 (+)
G183376 NA non-coding upstream 68648 9180940 ~ 9512425 (+)
G183391 NA non-coding upstream 274388 9305395 ~ 9306685 (+)
G183389 NA non-coding upstream 292931 9283609 ~ 9288142 (+)
G183361 NA non-coding upstream 541324 9000855 ~ 9039749 (+)
G183395 NA non-coding downstream 72891 9654267 ~ 9657602 (+)
G183426 NA non-coding downstream 94715 9676091 ~ 9677003 (+)
G183437 NA non-coding downstream 177442 9758818 ~ 9769351 (+)
G183448 NA non-coding downstream 263627 9845003 ~ 9852352 (+)
G183461 NA non-coding downstream 309404 9890780 ~ 9899728 (+)
G183387 NA other upstream 287370 9211334 ~ 9293703 (+)
tll1 tll1,LOC107548346,LOC107745060,LOC107591552 other upstream 597104 8870837 ~ 8983969 (+)
G183215 NA other upstream 2363934 7214471 ~ 7217139 (+)
LOC103028013 LOC108410819,LOC107548356,LOC107655813,LOC107702399,LOC107709454,LOC107562618,LOC108260988 other upstream 2571150 6897480 ~ 7009923 (+)
LOC103036850 NA other upstream 2916310 6523213 ~ 6664763 (+)
LOC111195202 NA other downstream 257560 9838936 ~ 9844659 (+)
LOC111195140 NA other downstream 483476 10064852 ~ 10072047 (+)
LOC111195207 LOC107375340,LOC106958509,LOC105896809,LOC107671222,LOC107690788 other downstream 517170 10098546 ~ 10101547 (+)
G183671 NA other downstream 528490 10109866 ~ 10110741 (+)
LOC111195212 LOC108414267,LOC106946373,LOC103130468,LOC102227983,LOC108269716,LOC108261415,LOC105936005,LOC107386469,LOC107577828,LOC107569598,LOC107677420 other downstream 564077 10145453 ~ 10171103 (+)

Expression


Co-expression Network