G184051


Basic Information

Item Value
gene id G184051
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 12195212 ~ 12196658 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU249404
cttAACCCCTTTTTACAtggttatccagctcaaagtagctccacaactcattggtagaatccggagaacCCTGACATCTAAAGCAAGGCATtaagaacttaaaaaatgtattttaaaaaaataaatctgtttccAATCCGTAGTGTAAGATAAATCTCCAGGTGCAGCCATCTTAAAGTTAAGTCATTGCAAGTTGAATGCTGAGCACAATTGAATTAGTATAGAGGAGccgtttttttaattaattcagtggaaatgcatgCATTCCAGctattgctgaaaatatctggttACTGGTGATATGAGAtggaagaacacacacactaaaaaattATTGTTCATGCTCAGCACTCGACCTGCCATGACTTTATTTTAAGATGGCGGTGCCTGGACTCTGTGGGATGCCTTGTTTTAGATTTCAGGGCTCTGCGGATTTTAGCATTGagttgtggagctactttgagctggataatggtgtaaaaCGCTGTATCACccattctaaagcctgtttggaCAAAAGAACCAAATTGCTGGATCTCGGATCGCtgagggagaacagaggtgggaTATTCACCAAAGGTTAGTATTCTATCATGTTTACTACAgccaaagtcaatttcacacctgAATTctcttttaactttaaaaatctGGTTTGAGCTGAGCCACTACAACAATGCCAGCtaacattttagaaaatacACATCCCCAATGAGAAGGTTTGGAGAGGGTTGGATAGGAGAGGAGTAAACCTTACCCCTACAGGAGCTTAGGAAAGAGGAGGTGAGTAGAGAAAGCAGAGGgtagaagagagggagaggtttGCCTCCTTTCCTACAATTTTCCCTGAATCAATGAACAGTTTATTTCATATCTACATAACTGATCTTTCAACAAAATTTTAATGCTTCGACAACCAATGTACAAATTTATCAAACAGCTATTTCCTGGTGTAACCTTCAAGAACCAAGGGACCATTTCAACAATATACAGTCTTACTGTGTGCGGGTGAGGTGGTAGTTGCCAACCGAATCACTGGAGCAATTTGAGTTTCAGTGCATGTACTTTTGGTGTAAGCTTAGATGAGTCCAGGTCCATCAGGGTTTTCTGGAACACCTCAAATGTACGCTTCAGGCTTTTTGGATAGCTCAAGTTGGGTGCATAAATCTGCCCATAAAGCAGAGAGAACGGAGAACGTCCACGCCTTCCAGCACAACACCAACATCTGCAAAGCATCCATCACCTGGACAATCAGAACAATGTCCCTCTGCTCAGACAGTGTAGATTCCCATAGTCTTCTCTGCAATGCCAGCCTCAGCCTCTCTGGATTCAATGTCCTGGAATATAAAGAGAACAGAATGATGTTCTGTGTGACCCTAACCATGACCACCAAAATCTAAGCAGCTCCAAGATGCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249404 True 1418 TUCP 0.41 2 12195212 12196658

Neighbor

gene id symbol gene type direction distance location
cfap36 cfap36 coding downstream 567738 11613656 ~ 11627474 (-)
pnpt1 pnpt1,LOC106607983 coding downstream 583361 11597278 ~ 11611851 (-)
ppp4r3b ppp4r3b,smek2 coding downstream 600540 11582838 ~ 11594672 (-)
ccdc88a ccdc88a coding downstream 621069 11511180 ~ 11574143 (-)
rps27a rps27a coding downstream 763315 11429249 ~ 11431897 (-)
LOC103046990 rasgrp2,LOC108427446,LOC108261011,LOC106608563 coding upstream 510994 12707652 ~ 12760931 (-)
mpdz mpdz coding upstream 619922 12816580 ~ 12879020 (-)
LOC103027614 LOC103027614 coding upstream 1602863 13799521 ~ 13807329 (-)
LOC103028152 NA coding upstream 1616740 13813398 ~ 13827899 (-)
drap1 drap1,LOC106608686 coding upstream 1854072 14050730 ~ 14058635 (-)
G183963 NA non-coding downstream 715823 11476636 ~ 11479389 (-)
G183960 NA non-coding downstream 726959 11467857 ~ 11468253 (-)
G183884 NA non-coding downstream 848049 11346910 ~ 11347163 (-)
G183857 NA non-coding downstream 1007670 10955599 ~ 11187542 (-)
LOC111195215 NA non-coding downstream 1018028 11157282 ~ 11177184 (-)
LOC111195221 NA non-coding upstream 331916 12528574 ~ 12633591 (-)
G184094 NA non-coding upstream 485837 12682495 ~ 12682697 (-)
G184150 NA non-coding upstream 596124 12792782 ~ 12794964 (-)
G184152 NA non-coding upstream 598586 12795244 ~ 12795519 (-)
LOC111195223 NA non-coding upstream 609623 12806281 ~ 12812440 (-)
gtf2a1l NA other downstream 783568 11402707 ~ 11411644 (-)
G183880 NA other downstream 888391 11306289 ~ 11306821 (-)
G183585 NA other downstream 2342831 9845822 ~ 9852381 (-)
G183559 NA other downstream 2537598 9655313 ~ 9657614 (-)
LOC111195271 NA other downstream 4692783 7490075 ~ 7502429 (-)
LOC111195225 NA other upstream 1029675 13226333 ~ 13303680 (-)
LOC111195226 NA other upstream 1354474 13551132 ~ 13594753 (-)
LOC103031091 map3k11,LOC108427450,LOC108260854,LOC107748023 other upstream 1792151 13988809 ~ 14040245 (-)
LOC103032041 NA other upstream 1866986 14063644 ~ 14116456 (-)
trnas-gcu_5 NA other upstream 1893048 14089706 ~ 14089787 (-)

Expression


Co-expression Network