G184285


Basic Information

Item Value
gene id G184285
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 13743028 ~ 13743451 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU249730
TCtagtaaaaagataaaaagttgTCTTTATCTATAGTAATAGATAAAGATCTAACTATGTGGATTGATAGAGAAATTAAATGTAACTTCAACAACCAAGCAAGCAATGAAAAAATAGTTTCTGTCATTTATTGTGCAAATTCTAACTAACACTCACGAAAAATGAAAAAGGCATACACATGTAAGTAACAACAGTCTGATAGTCGGATGTAAATGATCtccagaaaaaagtaaaaaaattaggaaaaaaaaataaagcttttgtTAGGGTTGGGGTGAACTAGACTACTTTCAGAGATGATGTTTGCCCAGCTCTTAGCATTGTGCTGAACAGTGGTTAATCTCTCACGCAACTGCCTGACCACTGAACTGTCCTGTACACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249730 True 382 lncRNA 0.34 2 13743028 13743451

Neighbor

gene id symbol gene type direction distance location
LOC103042284 LOC103042284,LOC108427430 coding upstream 33385 13707689 ~ 13709643 (+)
hgfac NA coding upstream 88755 13630542 ~ 13654273 (+)
LOC103041974 LOC108427427 coding upstream 216616 13305949 ~ 13526412 (+)
LOC103047288 LOC108427443 coding upstream 476628 12899191 ~ 13266400 (+)
LOC103041365 LOC108427445 coding upstream 950745 12765229 ~ 12792283 (+)
heatr5b heatr5b coding downstream 86379 13829830 ~ 13856036 (+)
LOC103029182 LOC108429273,LOC108260865 coding downstream 113518 13856969 ~ 13906069 (+)
pld5 NA coding downstream 164724 13908175 ~ 13977078 (+)
LOC103033313 LOC103385808,LOC103366237,LOC107690779,LOC103033313,LOC102208922 coding downstream 353373 14096824 ~ 14133131 (+)
ptprd ptprd coding downstream 625574 14369025 ~ 14972802 (+)
G184268 NA non-coding upstream 13086 13724756 ~ 13729942 (+)
G184203 LOC108427427,LOC108260577 non-coding upstream 151954 13558816 ~ 13591074 (+)
G184201 NA non-coding upstream 192983 13546162 ~ 13550045 (+)
LOC111195227 NA non-coding upstream 404957 13334495 ~ 13338071 (+)
G184192 NA non-coding upstream 444913 13297784 ~ 13298115 (+)
LOC111195229 NA non-coding downstream 42427 13785878 ~ 13801142 (+)
LOC111195228 NA non-coding downstream 57906 13801357 ~ 13827701 (+)
LOC111195230 NA non-coding downstream 238597 13982048 ~ 13997645 (+)
G184274 NA non-coding downstream 245441 13988892 ~ 13990906 (+)
LOC111195231 NA non-coding downstream 256566 14000017 ~ 14000904 (+)
LOC103025917 LOC108427442 other upstream 51864 13660147 ~ 13691164 (+)
LOC111195141 LOC107096934,LOC108427427,LOC103480793 other upstream 197533 13535062 ~ 13545495 (+)
G183996 crgm2,LOC103042598,LOC108441183,LOC108427435,LOC108427436,LOC108427240,LOC108260579,LOC108260664,LOC108260583 other upstream 2051092 11690901 ~ 11691936 (+)
ppp1r21 ppp1r21,LOC107578819 other upstream 2239549 11483052 ~ 11503479 (+)
clhc1 NA other upstream 2286655 11431984 ~ 11456373 (+)
c21h11orf68 drap1,cunh11orf68,c29h11orf68,LOC106608686,LOC107684582,LOC105923970,LOC107748024,LOC107670404,LOC103032366 other downstream 307336 14050787 ~ 14063300 (+)
G184594 NA other downstream 1515925 15259376 ~ 15261534 (+)
chrna9 chrna9,LOC107548308 other downstream 1996767 15740218 ~ 15750689 (+)
G184727 slit2 other downstream 2709889 16453340 ~ 16486424 (+)
osbp osbp,LOC108434340,LOC108260600 other downstream 2746674 16490125 ~ 16532700 (+)

Expression


Co-expression Network