G184330


Basic Information

Item Value
gene id G184330
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 13676337 ~ 13677778 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU249782
tTTCATTATTAATGTTGGAGGGAAACAGAAGGAAAGGTTGAGGAAAAGTCTTTGAAGCAGGAAAAAGGAGAACAGGTTGGGTCTTTCACTCTTTAACTCTCTGCTTGACTAAAGGAAGGAAGATGTCCAGTTTATCCGGAAGCTTGTGGCTGATCTCTTACCTTCTTCTGTGGCTTCCTTATTACTGATGCTGGTTTCTGGCTGTTCTGAAGTTTCTGGCTGGATCAAGCTGCATCTATTTTCTGGAGGCGTGGCCTTGGGCAGCATGCAGCCACCCTGTCCTTTCCTACATTGCAGGCAGTTCTCATAGATTGATGAGTGAGAGGCACGGTGGGAAGGAGTGGTGTGACTGATGGTGGATGCAGGAGATGTGGGTGATGCcagagctaatgctaacattcGCTCATATTGGCTGGTTCTGACTGATCTCTGGTTATCATTCCCCGGGGGACAATAATGCCCCGGCTGATGAGATAACAGAAGGCTTGGTTTGACTGACACCGTGTCAGATTTTCCTGGGCTATAGTGCACCAGAAGGTCATTCAGGCTGTCCATATAACTCTCAGGGCTTCTCTCCTGCAGTGTTTGATTAGTCTCTGAACTTCCACATGGCAGGTCCTGCATGCTGGAAGGTGCAGAAGACTCTGTTTCATGCTGTTTAGTGGGACTCTCCATGGCATCTGTGTTGATACTGGCTGATTTTTTTACCTGGCACGCCTGGTTGTAGTGTAGATCCTGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249782 True 743 lncRNA 0.48 2 13676337 13677778

Neighbor

gene id symbol gene type direction distance location
mpdz mpdz coding downstream 797317 12816580 ~ 12879020 (-)
LOC103046990 rasgrp2,LOC108427446,LOC108261011,LOC106608563 coding downstream 915406 12707652 ~ 12760931 (-)
LOC103040758 LOC108427447 coding downstream 1151017 11673093 ~ 12525320 (-)
cfap36 cfap36 coding downstream 2048863 11613656 ~ 11627474 (-)
pnpt1 pnpt1,LOC106607983 coding downstream 2064486 11597278 ~ 11611851 (-)
LOC103027614 LOC103027614 coding upstream 121743 13799521 ~ 13807329 (-)
LOC103028152 NA coding upstream 135620 13813398 ~ 13827899 (-)
drap1 drap1,LOC106608686 coding upstream 372952 14050730 ~ 14058635 (-)
lurap1l lurap1l coding upstream 509898 14187676 ~ 14198597 (-)
LOC103033946 tyrp1,tyrp-1,LOC108260967,LOC105903131 coding upstream 522445 14200223 ~ 14207686 (-)
G184256 NA non-coding downstream 56501 13619632 ~ 13619836 (-)
LOC111195153 NA non-coding downstream 57712 13615683 ~ 13618625 (-)
LOC111195158 NA non-coding downstream 70754 13603276 ~ 13605583 (-)
G184244 NA non-coding downstream 100015 13517679 ~ 13576322 (-)
G184250 LOC108427427 non-coding downstream 117222 13553688 ~ 13559115 (-)
G184338 NA non-coding upstream 46980 13724758 ~ 13729943 (-)
G184354 heatr5b non-coding upstream 157003 13834781 ~ 13836418 (-)
G184396 NA non-coding upstream 250328 13928106 ~ 13928313 (-)
G184422 LOC104965148,LOC104966956,LOC103385808 non-coding upstream 450750 14128528 ~ 14131095 (-)
LOC111195216 NA non-coding upstream 502327 14180105 ~ 14185344 (-)
LOC111195226 NA other downstream 81584 13551132 ~ 13594753 (-)
LOC111195225 NA other downstream 372657 13226333 ~ 13303680 (-)
G184051 NA other downstream 1479679 12195212 ~ 12196658 (-)
gtf2a1l NA other downstream 2264693 11402707 ~ 11411644 (-)
G183880 NA other downstream 2369516 11306289 ~ 11306821 (-)
LOC103031091 map3k11,LOC108427450,LOC108260854,LOC107748023 other upstream 311031 13988809 ~ 14040245 (-)
LOC103032041 NA other upstream 385866 14063644 ~ 14116456 (-)
trnas-gcu_5 NA other upstream 411928 14089706 ~ 14089787 (-)
trnas-gcu_6 NA other upstream 413731 14091509 ~ 14091590 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other upstream 1631731 15309509 ~ 15340580 (-)

Expression


Co-expression Network