G184338


Basic Information

Item Value
gene id G184338
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 13724758 ~ 13729943 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU249794
acaaaagacaaaatacaaaagactcgacactgaacattctaacagaggggcttaaatacaagaggagagtgagaaacacctgggctaggaagacgagggggcggggttacaaacaggacacaggtgagaacactgatgctacagggcagggctggggcggagctagggtggagacaaatactaacaacaacaatagcacatggctgtgaacactgacaggaaaacagaggggcaggagcacaagagaccaaacgagggagaaacagaagacagacaaaggCTAAACTGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249794 True 292 lncRNA 0.49 2 13724758 13729943

Neighbor

gene id symbol gene type direction distance location
mpdz mpdz coding downstream 845738 12816580 ~ 12879020 (-)
LOC103046990 rasgrp2,LOC108427446,LOC108261011,LOC106608563 coding downstream 963827 12707652 ~ 12760931 (-)
LOC103040758 LOC108427447 coding downstream 1199438 11673093 ~ 12525320 (-)
cfap36 cfap36 coding downstream 2097284 11613656 ~ 11627474 (-)
pnpt1 pnpt1,LOC106607983 coding downstream 2112907 11597278 ~ 11611851 (-)
LOC103027614 LOC103027614 coding upstream 69578 13799521 ~ 13807329 (-)
LOC103028152 NA coding upstream 83455 13813398 ~ 13827899 (-)
drap1 drap1,LOC106608686 coding upstream 320787 14050730 ~ 14058635 (-)
lurap1l lurap1l coding upstream 457733 14187676 ~ 14198597 (-)
LOC103033946 tyrp1,tyrp-1,LOC108260967,LOC105903131 coding upstream 470280 14200223 ~ 14207686 (-)
G184330 NA non-coding downstream 46980 13676337 ~ 13677778 (-)
G184256 NA non-coding downstream 104922 13619632 ~ 13619836 (-)
LOC111195153 NA non-coding downstream 106133 13615683 ~ 13618625 (-)
LOC111195158 NA non-coding downstream 119175 13603276 ~ 13605583 (-)
G184244 NA non-coding downstream 148436 13517679 ~ 13576322 (-)
G184354 heatr5b non-coding upstream 104838 13834781 ~ 13836418 (-)
G184396 NA non-coding upstream 198163 13928106 ~ 13928313 (-)
G184422 LOC104965148,LOC104966956,LOC103385808 non-coding upstream 398585 14128528 ~ 14131095 (-)
LOC111195216 NA non-coding upstream 450162 14180105 ~ 14185344 (-)
G184447 NA non-coding upstream 606003 14335946 ~ 14336641 (-)
LOC111195226 NA other downstream 130005 13551132 ~ 13594753 (-)
LOC111195225 NA other downstream 421078 13226333 ~ 13303680 (-)
G184051 NA other downstream 1528100 12195212 ~ 12196658 (-)
gtf2a1l NA other downstream 2313114 11402707 ~ 11411644 (-)
G183880 NA other downstream 2417937 11306289 ~ 11306821 (-)
LOC103031091 map3k11,LOC108427450,LOC108260854,LOC107748023 other upstream 258866 13988809 ~ 14040245 (-)
LOC103032041 NA other upstream 333701 14063644 ~ 14116456 (-)
trnas-gcu_5 NA other upstream 359763 14089706 ~ 14089787 (-)
trnas-gcu_6 NA other upstream 361566 14091509 ~ 14091590 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other upstream 1579566 15309509 ~ 15340580 (-)

Expression


Co-expression Network