G184396


Basic Information

Item Value
gene id G184396
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 13928106 ~ 13928313 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU249860
ttgccatcagcggctgaagccctgagagagcacaattggccttgctctctctgggtgggtagatggcgctctctccccacattactccaaagagtgatgtcactcagcacaaggcatctgtgagctgatatatcggaactgagtcgctgcgacCAGCCTTTTTAACCGGACCTGTGTAGCCGGAAGCTCAGTGTCTCCATGAAGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249860 True 208 lncRNA 0.53 1 13928106 13928313

Neighbor

gene id symbol gene type direction distance location
LOC103028152 NA coding downstream 100207 13813398 ~ 13827899 (-)
LOC103027614 LOC103027614 coding downstream 120777 13799521 ~ 13807329 (-)
mpdz mpdz coding downstream 1049086 12816580 ~ 12879020 (-)
LOC103046990 rasgrp2,LOC108427446,LOC108261011,LOC106608563 coding downstream 1167175 12707652 ~ 12760931 (-)
LOC103040758 LOC108427447 coding downstream 1402786 11673093 ~ 12525320 (-)
drap1 drap1,LOC106608686 coding upstream 122417 14050730 ~ 14058635 (-)
lurap1l lurap1l coding upstream 259363 14187676 ~ 14198597 (-)
LOC103033946 tyrp1,tyrp-1,LOC108260967,LOC105903131 coding upstream 271910 14200223 ~ 14207686 (-)
LOC103042598 crgm2,LOC103042598,LOC108427435,LOC108427436,LOC108260664,LOC108260584,LOC108260580,LOC108441183,LOC108260581 coding upstream 410401 14338714 ~ 14340598 (-)
LOC103043225 NA coding upstream 1331064 15259377 ~ 15261518 (-)
G184354 heatr5b non-coding downstream 91688 13834781 ~ 13836418 (-)
G184338 NA non-coding downstream 198163 13724758 ~ 13729943 (-)
G184330 NA non-coding downstream 250328 13676337 ~ 13677778 (-)
G184256 NA non-coding downstream 308270 13619632 ~ 13619836 (-)
LOC111195153 NA non-coding downstream 309481 13615683 ~ 13618625 (-)
G184422 LOC104965148,LOC104966956,LOC103385808 non-coding upstream 200215 14128528 ~ 14131095 (-)
LOC111195216 NA non-coding upstream 251792 14180105 ~ 14185344 (-)
G184447 NA non-coding upstream 407633 14335946 ~ 14336641 (-)
LOC111195232 NA non-coding upstream 1025131 14953444 ~ 15001573 (-)
LOC103043324 NA non-coding upstream 1119434 15047747 ~ 15052870 (-)
LOC111195226 NA other downstream 333353 13551132 ~ 13594753 (-)
LOC111195225 NA other downstream 624426 13226333 ~ 13303680 (-)
G184051 NA other downstream 1731448 12195212 ~ 12196658 (-)
gtf2a1l NA other downstream 2516462 11402707 ~ 11411644 (-)
G183880 NA other downstream 2621285 11306289 ~ 11306821 (-)
LOC103031091 map3k11,LOC108427450,LOC108260854,LOC107748023 other upstream 60496 13988809 ~ 14040245 (-)
LOC103032041 NA other upstream 135331 14063644 ~ 14116456 (-)
trnas-gcu_5 NA other upstream 161393 14089706 ~ 14089787 (-)
trnas-gcu_6 NA other upstream 163196 14091509 ~ 14091590 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other upstream 1381196 15309509 ~ 15340580 (-)

Expression


Co-expression Network