G184836


Basic Information

Item Value
gene id G184836
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 15564622 ~ 15564883 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU250464
TATCAGAACTGGTTGGGTTAACTGAATTAATCACGGCGTTAATTGGTGATAACAGGTGGGTGGCACTGTGCTAGTTACGTCTCTTACGGCAACAACTAAtcgattattaaaataattagtaactaatttaataatcgAGTAGTTGTGTCTACAGTATTACAGTCACATAACTACAGTTGCTACCCGCTAATGAGGGGCATTAACCCGACCAACGCCGTGACATTAACCACAGAGCTGTGAGTAAATAAGGAAGAGTCACGGT

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0060030 dorsal convergence biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250464 True 262 lncRNA 0.40 1 15564622 15564883

Neighbor

gene id symbol gene type direction distance location
LOC103043828 LOC108437730 coding downstream 3790 15428393 ~ 15560832 (-)
LOC103041363 qdpr,dhpr,qdprb1,LOC108437732,LOC107750446,LOC107702409,LOC107562607 coding downstream 192185 15367109 ~ 15372437 (-)
LOC103041667 ldb2b,LOC108434309,LOC107562611,LOC107750444,LOC108260957,LOC107548319,LOC107671914,LOC107702407 coding downstream 212336 15332135 ~ 15352286 (-)
LOC103042179 NA coding downstream 260707 15265108 ~ 15303915 (-)
LOC103043225 NA coding downstream 303104 15259377 ~ 15261518 (-)
rfc1 rfc1,LOC102787736 coding upstream 51211 15616094 ~ 15630005 (-)
rpl9 rpl9,LOC107671920,LOC107700291,LOC107709470 coding upstream 67371 15632254 ~ 15637092 (-)
ugdh ugdh,LOC107757604 coding upstream 80255 15645138 ~ 15659566 (-)
pds5a pds5a,LOC107757607 coding upstream 119933 15684816 ~ 15707540 (-)
gpr75 gpr75,LOC107602942,LOC107683917,LOC107654975,LOC107553188,LOC107705414,LOC107739897 coding upstream 198303 15763186 ~ 15767780 (-)
LOC111195235 NA non-coding downstream 145415 15412667 ~ 15419207 (-)
G184816 gtf2e2,LOC107671915,LOC107548363 non-coding downstream 177521 15384714 ~ 15387101 (-)
G184818 NA non-coding downstream 185416 15372772 ~ 15379206 (-)
LOC103043324 NA non-coding downstream 511752 15047747 ~ 15052870 (-)
LOC111195232 NA non-coding downstream 563049 14953444 ~ 15001573 (-)
G184853 NA non-coding upstream 95784 15660667 ~ 15664885 (-)
G184854 NA non-coding upstream 100295 15665178 ~ 15665714 (-)
G184863 NA non-coding upstream 156424 15721307 ~ 15722297 (-)
G184865 NA non-coding upstream 161481 15726364 ~ 15726622 (-)
G184868 NA non-coding upstream 167498 15732381 ~ 15732755 (-)
smim18 smim18 other downstream 183414 15376658 ~ 15381208 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 224042 15309509 ~ 15340580 (-)
LOC103032041 NA other downstream 1448166 14063644 ~ 14116456 (-)
smim14 smim14 other upstream 101228 15666111 ~ 15671954 (-)
lrat lrat other upstream 1333295 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 1665202 17230085 ~ 17241027 (-)
G185295 NA other upstream 1687384 17252267 ~ 17254633 (-)
G185311 emc4 other upstream 1730618 17295501 ~ 17300782 (-)

Expression


Co-expression Network