LOC103030254 (LOC108413195)


Basic Information

Item Value
gene id LOC103030254
gene name LOC108413195
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 8 ~ 11201 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229290.3
AGAGAGGAGCTGTGTGAGTGGGGCAGTGGGGGGCTGGCCGGGGTCTCGGGagcagagtttattttaggattCAAAACTGAGCAGAAATTACTGACCGACTGTTCGTCCACCAGCGAGCAGGGCGGGATGGACACTAATGTACCTCTTCTCTCACCCCCTGTGACCTCAAAAGAGAATGACCCCATAAGCTCCCCTTTACCAAAACCTCTACCACACCTGAAAGGTCCCCACCCACCTTCCCAATCCCTGCAGAACTCCACTCCCACTTCTTCCACATCGCCTTCTATCAAGATGGATCCAGCATCTGCACTCAACCCCCCGACCCCATCCTCTGAACCCCAATCCCCTCCAGCTCCCACCTCTAACCCCTCCCCCTCCCATCAACCCACCAGTCTGACGCCCCCTACAGGCCACTCATCCCGAGCAGGAGGCAAGCGAAGTTTTGCGGCGGTGGCGAAGCAGATGGTGCTGGAGGGTCGGATGAAGAAAGAACAGACCAGTATGCAGGAGGAAGaggaTGAGACTGAGGAAGATTTGACATTTGAGGAATTACTGGAAAAAGCTAAAGGAGGAGATCCTAAAGCACAGAGCAatgtaggTAAACACTACCTGAAGCTGGCGCTGGACTCAGATACTGATGCTAACAACCAGCAAGCTGTGGAGTGGCTGCTGCGGGCAGCGAAACAGGGCCGCAAAGATGCAGCCCGACTACTGCAACGCTGCTGGATGCAGAAAAAAGGTATAACAGCAGAGAACGAGGAGGAAGTGCGCAAGCTATCGACTGAGAGTAAGTTTGAGCAGGCGGTTCGGCGAGCGGCGATGATGATGTACTGGAAACTGAACCCAGACAGGAAGGTGAAAGTGACCACTTCTGAAATGCTGCAGAACGTCAGTCAGGTCAACACAGGTGCCGTTTGTCCTGGAATGCCTACTGTCCAAACACAGAGGAAAGTCCTGGAGAACATGGTGGCTGCTGATTCCTCCCAGTATGTAGATGTGGAGAACTTTGTGGAAATGACTAAAAACTACGCTCAGGGCATCTCCCCAATGAGCAATGGTTCAGTCCAAAACAGCGGGGACAGCAGTCTGGACAAATGGCCCTCAGCATCAGCACCACTGGACCAGGGGGTGTCACCTGTATTGCAGAAGCGCACACGGAAAAGAAGTTGGGGAACTGGGATGATGCTTGACACCAAACGCAGTGGTGCCATGAAGAGAGCCATGGACATTAAAGCTCACTTCCtgGGTCTGCAGTACCCTCTGCACCTCATCCTGGAGATGAAAGAGCACTTGGTGGACTGGGCGTCCCGTGCTGGAGTCCAGTGGCTGAGCACCATCATCCCTACCCAGCATGTTAACGCTCTGatcttcttcttcatcatctCAAACCTGAGTGTCGACCTGTTCGCCTTCACCATCCCGCTGCTCGTCTTCTACCTGGCCTTCATCTCCATGGTGATCTGCACCCTCAGGGTGTTCCGCAGCAGTAAAGGCTGGGAGAATTTCAGTGCGCTGACCGCTCTGCTGACCCGCTTCGAACCCGGGCTGGATGTGGAGCAGGCCGAGACGCACTTCGGCTGGAATAATCTGGAACAGTACGTTTACTTCCTGGTGTCCGTGTGCTTTGTGATCTTCAGCTTCCCCGTGGCTGATAAGCGCTGGATTCCCTGCTCCGAGCTTTCCACCGTGGCCGTGTTCTTCACGGCTTTGAGCTACGTGTCCCTCAGCCCGTCCGCGGCAGCGTACGCTCGCAGGGCACTGATCATCGAGGTGGCGTCCTCTCTCTGTGCGCTCACCACTCAACTGCCTCAGCAAATGGCCCTGAGGGTTCTGGGACAAACCTTCACTGTGGTGCCGCTGGGAGAGAGTGTGGAGCTAACGCTCAGTCTGCCGTGCCTCCTCTACATCTATCTGTTTTACCTATTCTTCagCATGGCACGCATGCGTGGCTTCAGGGGCACCTACTGCTTCCTAGTGCCATACCTGGTTTGCTTCATGTGGTGGGAGTTCTCTGTGGTTCTGCTTCAGAACTCTACGCCAATCGGCCTCATCCGCACCTGCGTTGCCTATTTCCTGCTCCTGTTTGCCCTGCCTGTTTTGGCCCTGGGACTGGCCGCCATGCTGCTGATCCAAATTGCCAAGTGGTTCCTCGAGCTAGAGCTCACCAAGATGTTGGTTACGCTGGCGGTTTGTGCCGTTCCTGTCACTCTGAGACTCTGGACCCGATTCAGTCTGTCAATCCTGAAGGTCATGCGCTCCATCACCCACCGTGGCCCTGTGAAGCTCATCCTGCTCTGCCTCACCACCGTAGTGTTGATGTGTGGCACCTACGTCTACAACACTGAGGGACTGAAGGTGTATAACTCCACCCTTACCTGGCAGGAGTATGGGTCGCTCTGCGGGCCACCT

Function

NR:

description
PREDICTED: wolframin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229290.3 True 2409 mRNA 0.55 12 8 11201

Neighbor

gene id symbol gene type direction distance location
LOC111195164 NA coding upstream 17443 28644 ~ 35513 (-)
LOC103030885 LOC107692594,LOC107702307 coding upstream 98563 109764 ~ 190741 (-)
LOC103027497 LOC108413410 coding upstream 180757 191958 ~ 199979 (-)
rps6kb2 rps6kb2,LOC108413157,LOC108260512,LOC103368287 coding upstream 196450 207651 ~ 231129 (-)
LOC111195168 NA coding upstream 253759 264960 ~ 270360 (-)
G181846 NA non-coding upstream 81764 92965 ~ 94589 (-)
G181853 NA non-coding upstream 209541 220742 ~ 262756 (-)
G181858 NA non-coding upstream 230485 241686 ~ 242173 (-)
LOC111195159 NA non-coding upstream 311430 322631 ~ 323782 (-)
G181888 NA non-coding upstream 383775 394976 ~ 395203 (-)
LOC103026712 NA other upstream 34535 45736 ~ 48294 (-)
cisd2 cisd2 other upstream 482989 494190 ~ 508064 (-)
LOC103021730 fat1,fat1a,LOC108441695,LOC107702333 other upstream 1574294 1585495 ~ 1712137 (-)
LOC103039001 caspase-3,LOC108441697,LOC103370277 other upstream 3383918 3395119 ~ 3454586 (-)
G182501 NA other upstream 3536432 3547633 ~ 3550413 (-)

Expression


Co-expression Network