heatr5b (heatr5b)


Basic Information

Item Value
gene id heatr5b
gene name heatr5b
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 13829830 ~ 13856036 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007230160.2
TTCTGACGCTGCCTGACGCAGGGGTGGCTAGCTGGGTTAGCTTGGAGGCTGGAGACTGTCACCAGTGTATCTGAGGTGAAGCAGTCACTTAGTAAAAGAGACCTGCCTTCAGAAGACCCCCTGGCTGCTTTCAGTGCCCACTAATGGAGCTGGCACACAGTCTCCTGCTCAATGAAGATGCCCTGGCCCAGATCACAGAAGCCAAGAGGCCAGTCTTCATATTCGAGTGGCTTCGGTTCCTCAATAAAGTTCTCGTAGCAGCTAATAAGGTTGATGTGAAGGAGAAGCAGAAGAAACTGGTGGAACAGCTCACTGGGTTGATCAGCAGCAATCCTGGACCCCCTACGAGAAAGCTATTGGCTAAGAACCTCGCTACACTCTACAGCATCGGCGACACTTTCACCGTCTTCCAGACGTTGGACAAGTGCAATGACATCATCAAAAACAAGGATGACACTCCAGCCTATCTGCCCACCAAGCTTGCTGCAGTGGCTTGTGTTGGGGCCTTCTATGAGCGAATGGGCCGGATGCTGGGCAGCTCCTTTCCAGAAACAATCAACAACCTTCTGAAAGCCCTGAAGAATGCAGAGTCTCAGGGCCGCAGTGAGATCCTCCTCAGCCTGCAGAAAGTTCTCAGTGGCCTGGGTGGTGCTGCTGCATCCTGCCACAGAGATATCTACAAGAATGCCCGCTCTCTCCTCACTGACAGGTCCATGGCTGTGCGCTGTGCTGTGGCTAAGTGTTTGCTGGAGCTGCAGAATGAAGCGGTGTTCATGTGGACCACAGAGCTGGAGAATGTGGCCACGCTGTGCTTCAAAGCTCTTGAAGGCTCTACATACGGCGTGCGCGTGGCTGTGTCCAAGCTGCTGGGAACTGTAATGGCTACTGCACTCTTGCCTAAACAGGCTGCAGTTATGCGTCAGAATGTGAAGCGAGCCACACTGGAGGAGGTGCTTGAGCTGATGGCCACAGGTTTTCTGCGAGGGGGTTCCGGATTCCTGAAGAGTGGAGGAGAGATGCTGAAAGGAGGAGGTTCAGTCAGCAGGGAAGTCCGAGTTGGAGTCACTCAGGCATATGTAGTGTTTGTGACCACACTGGGCGGTCAGTGGCTGGAGAGGAACTTTGCCACCTTCCTGTCACACGTATTAGAGCTGGTGGCTCACCCTCGGGCCACACAGACCCACGTAGAGGCAGTGTACTCGCGCCGCTGTGTCTCTTTTGCCTTGCGTGCCACACTAGGAGGCCTGCTGGGGGAGAAGGCCCAAATTGCTGCCGCCAAGGAGATCTGCCAGGCCATCAACAAGCAGATGAGGGCAGTGGAGGCGGTAGTCAGTGACAGCAGTGGTGAAAATAAGGGTGGGGCTGCGGACGTGTCGGCCAGTCAGCACGTGATGGTGTGTGCTCTGAAAGAACTGGGCAGTCTGGTCCAGAGCCTCAGTGCTACAGCCTCTCCACTCATACAGGAGCCTTCTAttgGTCTGTTGGAGACGGTGACGTCGGTCCTTCTGCACCCCAGCATGGCGGCCCGTCTGGCAGCAGCGTGGTGCCTGCGCTGCGTTGCCGTGGCGCTGCCCTATCAGCTGACCCCTCTACTGGACCGCTGTGCCGAGCGCATCAACACCCTGAAGAGCTCGCCTGAAGCCGTCAGCGGCTACAGCTTCGCAAtggctgctctgctgggtggaGTGTACCAGTGCCCGCTGGGTATCCCCCACTCCAAGGGCAAGATGGTGGTCAGCATAGCTGAGGATCTGTTGCGTTCCGCAGCTCAGAACAGTCGTCTCTCTTTGCACCGAACGCAGGCTGGCTGGCTGCTCCTGGGAGCCCTCATGACTTTAGGATCATCTCTGGTGCGCTACCACTTGCCTAAGATGCTGTTGCTCTGGCGGAATGTGTTCCCTCGGTCGCAGAAAGAGCTGGAGGCTGAAAAAGCCAGAGGAGACTCCTTCACCTGGCAGGTCACTCTGGAGGGCAGAGCTGGAGCACTTTGTGCCATGCGAAGCTTCGTGGCTCACTGTCCCGAGCTGCTGACTGAAGACGTGATCCGCAGGCTGATGACTCCTATTGAATGTGCCATGACCATGATGTCTCATATTCCTGCAGTTATAAAGGTACATGGAGCTCACCTAAAGGCCAGTGCTGCTATGGTGCGTTTGAGACTCTACGACATTCTGGCCCTGCTTCCGCCCAAGACTTATGAAGGCAGTTTCAGTGCTCTTCTGAGGGAGCTGGTGGCTGAGTTTACACTGACGGATAATTCAGCCAACACAACCACCTCCTTGTTGCGTTCACTTTGTCACTATGATGACAGTGTCCTCATGGGCTCCTGGCTGCAGGAAACTGACCACAAATCCATTGAGGACCAGTTGCAGCCTAACAGTGCATCAGGCAGTGGTGCTCTGGAACATGACCCCTCCTCCATATACCTGCGAGTTCCTGTTGGAGAAGCTATCCCAGGCCCGCTCCCACTGGGTGTCTCAGTTATTGATGCGTCTGTGGCACTTTTCGGTGTAGTCTTCCCCCATGTCTCCTTTAAACATAGGCTCCAAATGCTGGACCACTTTGCTGAGTGCATCAAACAAGCTAAAGGAGTCAGACAGCAGGCTGTCCAACTCAACATCTTCACTGCTGTCCTCAGTGCACTAAAGgGTCTAGCTGAAAATAAGAGTACGCTGGGACCGGAGGAGGTGCGGAAGTCTGCTCTGGCCTTGGTGATGGGTGCTCTGGATAACCCCAACCCCATCCTGCGCTGTGCTGCTGGAGAAGCTCTGGGACGCATGGCACAGGTTGTAGGAGAAGCTACCTTCATCGCCAGTATGGCTCAGCACAGTTTTGACAAACTGAAGTCAGCTCGGGACGTGGTGTCCAGAACGGGTCACTCTCTGGCTCTTGGCTGTCTGCACCGATACGTGGGAGGCATCGGGTCAGGTCAGCACCTTAAGACCAGTGTGAGCATTCTCTTGGCACTGGCTCAGGACGGAACCTCCCATGAGGTTCAGACATGGGCGCTGCACTCCCTGGCTCTCATTGTAGACTCCAGTGGGCCGATGTACAGAGGTTATGTGGAGCCCACTCTGTCCCTGGTGCTCACCCTCCTCCTGACTGTGCCTCCCTCTCACACAGAGGTGCATCAGTGTCTGGGCCGCTGTTTGGGAGCCCTCATCACCACTGTGGGCCCAGAATTACAGGGCAACAGTCCCACAATTTCGACCATTCGCTCCTCATGTCTGGTGGGCTGTGCCATAATGCAGGACCACTCAGACTCTCTGGTGCAGGCAGCGGCCATCTCTTGCCTGCAGCAGCTGCACATGTTTGCCCCACGTCACGTCAACTTATCTAGCCTGGTGCCCTGCCTCTGTGTGCACCTCTGCAGTTCTCATCTGCTTCTGCGTCGGGCTGCGGTGGCATGTTTGCGGCAGTTGGCTCAGAGAGAGGCAGCCGAGGTGTGTGCATACGCCATGAGCCTCGCCAAGAAAGCTGGAGACAGCAAAGAAAGCACCACTATCAACCTAAACATCACTGAGACTGGTTTAGAGGGTGTTCTTTTTGGCATGCTGGACCGGGAGACAGATAGAAAACTGTGCTCGGACATCCATGACACACTTGGCCATATGCTGTCCTCTCTAGCTGTGGAGAAACTCTCGCATTGGCTCAAACTCTGCAAAGATGTCCTGGCTGCCAGCACAGAAGTTGGAGGTGCCTTGGCATTTGAAgtagagaaagaggaggaagacTCTGAGAAGAAGGATGAGATGGACGATGACACCATGTTTACAGGCCTGGGCGATGACGACAAAACAAAGCCCTCTGTTGCCCCCCGCTGGGTGACGCGGGTGTTTGCAGCCGACTGCTTATGTCGCATCATTCATCTGTGTGAAAATGCAGACAAGGCTCACTTTGATCTGGCCACTGCCCGCAGTGCCAAAGCCAAGAACCCTaaaggtgatctgctggtgttgcaTCTTTCGGACCTGATCCGCATGGCCTTCATGGCTGCCACGGATCACAGTAATCAGCTACGGATGGCCGGCCTGCAGGCCCTGGAGGACATCATTAAGAAGTTTGCCTCAGTACCGGAGCCTGAGTTTCCTGGTCATGTGATCCTTGAGCAGTACCAGGCCAATGTTGGAGCTGCACTACGACCAGCCTTTTCTCCTGATACTCCATCTGACATCACAGCCAAAGCTTGCCAGGTGTGTAGTGCTTGGATAGGCAGCGGTGTAGTGAGTGACCTGAACGACCTCCGCCGTGTCCACAATCTGCTGGTGTCCTCCCTGGACAAGGTGCAGGCTGGCAAGGGCTCTTCCAGCCAGCTGTACAGCGAGAGTGCCACCACCATGGAGAAACTGGCTGTGCTCAAAGCCTGGGCAGAGGTGTATGTGGTGGCTATGAAAATAAAGAAGGAGGCGGAGTCCAGGCCGGCTCGTCCTGTGAGGAGcggtgaggatgatgatgaggacATGGGTGATGAAGGAGATATCCTGCCTCCGGACAGCCTGATCACGCTGGTGCAGCCAGAGCTGCCCTCGCTGAGCCGGCTGTGGCTGGCTGCTCTCAGAGACTACGCTCTGCTGACCCTGCCGGCTGAGTTTGCCAGCCAGCTGCCCCCTGAAGGTGGGGCCTTTTACACTCCAGAGACGATAGACACCGCACGTCTGCACTATCGCAACTCATGGGCTCCCATTCTGCACGCCGTGGCTCTCTGGCTTAGCAACACAGACTTTGGAGCTGCTGAGGGTCCTGAGGAGCCCCAAACTGGTACTACAAGTCCTGCATATCCTCAGGGGCCACCTGCTCCAATCAAAAACCCTGATGAGCTGGCCAAAGACAGAATGCATCTACTGTTGGGCATCAGTATTGAGTTCCTGTGCTTCCCTCGCCCTGAGGAGCCTATTGAACGAGTGATGTCCTGCCTTCAAGCTCTCTGCACGCTGCTCGAAACTCCACAGGCTCGAAACCACATCGCAGAGGACCAGTTGCTTGCAGTAGAGCTGCTAAATGTGCTGCACAGGCTGCTGTTAACCCGGGACCCTCCCAGTGTTCAGCTGCAGGTGACTGCAGTAGTGCAAGAGACCATCCGCTCAGCCCAAGACCACCTGGACCAGCGCAGGAGCTCCAAGGGTGTGGAAGATGGTGGGGAGAAGGAGTCGGCGAGTGTGTTGGCGGAAGGAGGGGACACTGGAGAGCTGCAGCCAGGGAAGTCTCTGGTGTTCGCTGCCATGGAACTCCTGGTGTTTCTGCTGGTGCGTCACCTGCCTCAGGTCAACACCAAAGCCAGCGACTCTCCCAGCCACCTGCCTACCAAACCCCAGCCTCTGCCCGAGCACAGCAACCGCCTGGTGGCCGTCACCATCAGCATCCTAGCAGAACTGCCTGCACTGTGTTCTCcagcagGGAGTATGACCATCCTGCCCACAATCCTGTTCCTCATCTGTGGAGTGCTGAAGGAGACCGCCCTGAAAACCCCCGATGGTTCAGTACCTCTGCCTGTGTCAGCCGCCCTGCAGGGCATTAAGACCATCATCACTTCCCCACTGGGCCGTGTGGAGAAAACGCAGCAGCAGTGGACCAGCCTGGTCAGGAGCAGTCTGGCTTCTGTGCTGGAGTACTCCCAACCTGATGAGTCCAGGCCCAATATGGATGAAGTGAGCCTGCTCACTGCAATCACTTTGTTCTTGGTGTCCACCAGTTCTGAATTGGTCGGGGTCACCACCTTACAGAAGGGCTGCATAGAACGCTTCAGAAATGCTCTCAACTCCAGTGACCCTTGGGTCCAAGCTCGGTGCTATCAGCTCCTCCTCTCCGTGTTCCAGCACTCGAGCCGCGCTCTCTCCACACCCTACATCCACGCTCTGGCTCCTATGCTGGTGGAGAAGCTGAAGGGGGCGGAGCGTGCAAGGCCAGGGACCCCTGCTGAGCTCCAGGCTGTGCAAGAAGGAGTTAAAGTGCTGGAGGGCCTGGTGGCCCTGGGAGAAGAGCAGAATCGAGTTCAGCTGCTGGCTCTTCTGGTGCCCACCCTGATCTCCTACCTGCTGGATGAAAATGCCTTCTCCACTGCTCCTCCCCCGTCCAAAGGGCTGCATGAGTTCGCCCTTCAGAATCTGATGCGCATCGGACCCCTGTACCCTGCTGCCTTCAAGACCGTTATAGGAGCAGCACCTGAGCTGAAGACCCGCCTTGAGACCGCCATCCGAGCCAACCAGGCGAGCAGCAAAGCCAAGGCCGCGGCCAGGCAGGCCCAACCCACTGTGCAAGCCACACCCACCATCAAACTCAAAaccagctttttctaaaatcagcTTTTCTCAACTGACTTGTCCTTGCTCATCTCAAAAAGGCATTCTTTTAAAGTTACTGTGTAGTTTAAACTTTAGTTTGGACAAGCTTTAAATATGATGATTGAAACAAAGTTGAATGATACAGTTTCTTATTGAGTTCAATCATTTTTCACCACTCTTCTGTAAAACTTGACCATTAGAATTAATTCCAGTTAATTTGAGGGAAGATCATGTAGTTCTCTGTTGatgtatgtttttattcaaGTAAACCAGTTAAATTTTGATTAAATGTGTGCTACACAGAGACTGTGTCAGTTGGGGTAAAGCTATGCTGTTATAAATATGGATTCCAGGGTTTATGCTTCATCGTGTCAATCATGTGTGCTGGTGAATGTCCGAGTGAAACCGTTAAAGGGATGTAGTTTATTCTGTCgtggtcattttttttctggaaagcTTGTGAAATGCACCTTAATCAGAACGAATATCATGGAAGCACCTTTTTTGTAAAGTCACATTGCATCAATGTTCTTTTTGACAATTCCAGCAGTTTttcttcattgtttttttttttttttggatcctGTAAAGACCAAAACATGCAGAGCTGTACAGTAAATGTGCTGTAATATCACACAATTCCTTTTCTCTTCTCAGCTAAAACACTCCCTTTTAGTTAAGCATTATTTAGTAGATCATTAGTTGTCAGAAATTTGCTTTTAGACTTCGGACGATTTTGTAACTGTTACATTGGATATAGAACTCTTATTAGGaaacaataatgataaaaaaacaaccaatcaTTCAGTACCATTTGTGTTGTACATAGAGAATTACAGTTAAAATGAAAGCTATGATATACTGTAAAGTcgttttattattactattatttttttttaacctttttcatttttatttgctatatacatacatttatattgtcactgttAGAAAATGTTTCAACAAATACTAATGCTTCAAAGTAATGGAAGAGCCAAAAGAAATGCTCTACAATTATGAACCTCCTAGTGTAAATACTGcaaaatgataaatggaccaGTAGAAATGCTCCAGATTGATGAATAACtgatagaaatgcttcaaaatgctGCATGAACTAATACTTTTGCTCCAAAATAATGGAATAGCCAATAAAAATGCTACACAGTGATGAATGGACCAGtacaaatgctccaaaataactTGGAATAGAACATTTTACTTTTAGACTTtctttgtaaatgtttaatttgcaacatgaacattttttttgcatgacggTGACAATATGACACTTGGATTTAGCTTgacttttattaacattattcaCTGTCCTGGATTAAATGTGATGAGCATCTCTCTCATGCCTCTTATTTACTTCTTCTCCATATTGTttgttgcttttgtttttgctttagtTTGAAtagtttatgtaaaaaaaaaacaacatgtaaACAGTTCCACATGATTATTTATTCACTTTAGATGAAGACTTGACATTGCATTAAGCAATTACAGTGAAGCTGCACAGTCATTCACCATGTTACAGTGTGAAGTTTTGGTATTCACCAAGTCTAGAATGTGTTCTtgtattgttgtttgtttgggGTTTTTATGTTGAGTGTGGAGCTGCACAGTATAATAAATTGAGTCACATCCGGGCTGTTGGCAAAGTGGACAAATtgatctgaaaaataaagaaggttttatttaac

Function

symbol description
heatr5b Predicted to be involved in endocytosis; protein localization; and retrograde transport, endosome to Golgi. Predicted to be active in endocytic vesicle. Orthologous to human HEATR5B (HEAT repeat containing 5B).

NR:

description
PREDICTED: HEAT repeat-containing protein 5B-like

GO: NA

KEGG:

id description
K24814 HEATR5, LAA1; HEAT repeat-containing protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007230160.2 True 7993 mRNA 0.51 36 13829830 13856036

Neighbor

gene id symbol gene type direction distance location
slc24a2 slc24a2 coding upstream 44618 13735246 ~ 13785212 (+)
LOC103042284 LOC103042284,LOC108427430 coding upstream 120187 13707689 ~ 13709643 (+)
hgfac NA coding upstream 175557 13630542 ~ 13654273 (+)
LOC103041974 LOC108427427 coding upstream 303418 13305949 ~ 13526412 (+)
LOC103047288 LOC108427443 coding upstream 563430 12899191 ~ 13266400 (+)
LOC103029182 LOC108429273,LOC108260865 coding downstream 933 13856969 ~ 13906069 (+)
pld5 NA coding downstream 52139 13908175 ~ 13977078 (+)
LOC103033313 LOC103385808,LOC103366237,LOC107690779,LOC103033313,LOC102208922 coding downstream 240788 14096824 ~ 14133131 (+)
ptprd ptprd coding downstream 512989 14369025 ~ 14972802 (+)
LOC103042902 NA coding downstream 1393870 15249906 ~ 15255315 (+)
LOC111195228 NA non-coding upstream 2129 13801357 ~ 13827701 (+)
LOC111195229 NA non-coding upstream 28688 13785878 ~ 13801142 (+)
G184285 NA non-coding upstream 86379 13743028 ~ 13743451 (+)
G184268 NA non-coding upstream 99888 13724756 ~ 13729942 (+)
G184203 LOC108427427,LOC108260577 non-coding upstream 238756 13558816 ~ 13591074 (+)
LOC111195230 NA non-coding downstream 126012 13982048 ~ 13997645 (+)
G184274 NA non-coding downstream 132856 13988892 ~ 13990906 (+)
LOC111195231 NA non-coding downstream 143981 14000017 ~ 14000904 (+)
G184310 NA non-coding downstream 173990 14030026 ~ 14040220 (+)
G184314 rela,LOC108260779,LOC108427452,LOC100707676 non-coding downstream 217134 14073170 ~ 14076179 (+)
LOC103025917 LOC108427442 other upstream 138666 13660147 ~ 13691164 (+)
LOC111195141 LOC107096934,LOC108427427,LOC103480793 other upstream 284335 13535062 ~ 13545495 (+)
G183996 crgm2,LOC103042598,LOC108441183,LOC108427435,LOC108427436,LOC108427240,LOC108260579,LOC108260664,LOC108260583 other upstream 2137894 11690901 ~ 11691936 (+)
ppp1r21 ppp1r21,LOC107578819 other upstream 2326351 11483052 ~ 11503479 (+)
clhc1 NA other upstream 2373457 11431984 ~ 11456373 (+)
c21h11orf68 drap1,cunh11orf68,c29h11orf68,LOC106608686,LOC107684582,LOC105923970,LOC107748024,LOC107670404,LOC103032366 other downstream 194751 14050787 ~ 14063300 (+)
G184594 NA other downstream 1403340 15259376 ~ 15261534 (+)
chrna9 chrna9,LOC107548308 other downstream 1884182 15740218 ~ 15750689 (+)
G184727 slit2 other downstream 2597304 16453340 ~ 16486424 (+)
osbp osbp,LOC108434340,LOC108260600 other downstream 2634089 16490125 ~ 16532700 (+)

Expression


Co-expression Network