drap1 (drap1,LOC106608686)


Basic Information

Item Value
gene id drap1
gene name drap1,LOC106608686
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 14050730 ~ 14058635 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007230171.3
CAGCGGGACAAAGGAGTACAGACACAGAGCACACGGGCTAAAGCGGGCGGAGTCCTGTAAAACACAGCATGCCGAGCAAAAAGAAGAAATATAACGCCAGATTCCCCCCGGCAAGAATTAAGAAGATTATGCAGACAGATGAAGAAATAGGAAAAGTCGCTGCTGCCGTTCCTGTTATTATCTCGCGGGCACTTGAGCTGTTTCTGGAGTCTCTTCTGACGAAAGCCTGTCATGTTACCCAGTCACGGAACGCCAAAACTATGACAACATCGCATTTAAAACAGTGCATCGAACTGGAGCAGCAGTTTGACTTCCTGAAGGATCTGGTGGCTGCAGTGCCGGACATGCAAGGAGAGGGGGATGAGAATCATGCTGAGGGAGCAGAGAAGATCCCACGCAGaggTCGCAAGCCTGGCTCAGGGCGCAAGAACGGAGGAGCAGGAGCCAAGGGTAAAGACAAGAAGCTGTCAGGCACAGAGTCTGAACAAGAGGATGACACTGAGGACAGTGAGACTGATGGAGAGGAGGAGGACATTTCTCAGCCCAACACAAATATCCAGCCACCACCTCACTTccccagCCAAGACATGCCTCCTCAGTACATGCCCATGCCCGTGGGTGCCCCTCAGGGTACACTCTCCATGCCCATCAGCTCTTTCGCCCCCCACCCTTCAGTCATGGGGGTCATGCCACCCCCTCCAGCCCTGGTGCCGCACAAGGACGAAAACGACGACGACGAAGACTACGACTCTTAGCTTCTTCTCACCACCCTCGCCCCCtgttttacattacttttcttAAGTTGTTCTTATTTGGctgcaaaaaatgcaaaactgaTGGAAACAGAAGAGACAAGTTATACAAAGACAAACATGGAGTTAACGTCAGGTTACCAGCGAGTACAAAAATGGCATTGGCAAGATTGCAGCCACAATGTAAGAAGAAGAATAGGTTGTATATtagctgtgttttaatttttaagtatatcttattttattgtcGAGGAAAGCTTAAAACAGGAGCATTGTTTTTTAAAGCAAGTTCATAAGTTAATTGTTGCATTTTTGGCTCACCTGAGTCAGGTTTCGTTTTTTTGGAAATAGCCCACAAACAAGGATGTTTCgttattttcttttctatctttttttgcATAGAGATccccttgtatatattttttattttttattttgcttctgTCCTCTTAGGTTGCCATTCTTCTTTGCTGTTCTGTTCTGCTGTTTGTGATCTTCAGGACATATCACTCAGTTTTCAGTGTGCTTTGATTCATCTCGGCTCAGGGTGTTCTTCTAAACTTTCATACTCAATTTTTTCTGCGtgtttaaagaaaagaaagcgaGGAAAACCTGAACAGTAGCCCAGAACGTGTTGATTTGGACCCACAGACGTTCGCAGGAGTTTTTCGCTTGCTGTGAAATTTGGAAGCTATCAGTCAGATGAAGCTGATTGGGTCAGAACATTGCTTGCGTGTAGACTGAAATTCAAATCCATGCATTAATGGGTGATTTAATGAGTGAatacctttttgttttttttgtttttgttttcacctgaagttttaaaattaagttttattaaaaaaataagctttgcTATAAATGCAGCTTACCGGTCCAAACCGAGCTATGATCTGTCAATGGATCGCGATTGGGATGATCGAGCTTCACTCTCAGATTGAGAAATGGATTTTAGTTAACTTTCTCCCCAGGTTTTGATGTGTgcgatatgtaaaaaaaaagttttccggTTTCTCTATATTTATAAGCTAAAACCAGACCAGGATTGAGATACTTGCTTTTTTCTGAAAGaggacttttttgtttttgtggtaATGCACTCACTCTAAGGTTTATTTAGCCCCACACCCCTCCTATCAACAAACTGTGGAAGTTAAAAGTACAGTAAATGCACATTTATATCAACATTATTCTTGGTCTTGTatcttttaaatggttttaatggtctttgtgaGGGCTGAGAGGAGCCGAAAACCcctccccccaccaccacctgtTCCCCACCCACCCCCTTGTTTCTGTGGCCGTCTCTCGCTCCTCCAGGTGTGTAAAGTTTGGCTGCTCAGAGGCTGTATGTAAAACTTTTAACATTCTTATTTTGTATGAGTGAAATAAAGTGCAGATTTCAGTA

Function

symbol description
drap1 Predicted to enable several functions, including RNA polymerase II general transcription initiation factor activity; core promoter sequence-specific DNA binding activity; and transcription coactivator activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; positive regulation of transcription by RNA polymerase II; and transcription by RNA polymerase II. Predicted to be part of negative cofactor 2 complex. Predicted to be active in nucleus. Orthologous to human DRAP1 (DR1 associated protein 1).

NR:

description
PREDICTED: dr1-associated corepressor

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K21752 DRAP1, NC2-alpha; Dr1-associated corepressor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007230171.3 True 2166 mRNA 0.43 7 14050730 14058635

Neighbor

gene id symbol gene type direction distance location
LOC103028152 NA coding downstream 222831 13813398 ~ 13827899 (-)
LOC103027614 LOC103027614 coding downstream 243401 13799521 ~ 13807329 (-)
mpdz mpdz coding downstream 1171710 12816580 ~ 12879020 (-)
LOC103046990 rasgrp2,LOC108427446,LOC108261011,LOC106608563 coding downstream 1289799 12707652 ~ 12760931 (-)
LOC103040758 LOC108427447 coding downstream 1525410 11673093 ~ 12525320 (-)
lurap1l lurap1l coding upstream 129041 14187676 ~ 14198597 (-)
LOC103033946 tyrp1,tyrp-1,LOC108260967,LOC105903131 coding upstream 141588 14200223 ~ 14207686 (-)
LOC103042598 crgm2,LOC103042598,LOC108427435,LOC108427436,LOC108260664,LOC108260584,LOC108260580,LOC108441183,LOC108260581 coding upstream 280079 14338714 ~ 14340598 (-)
LOC103043225 NA coding upstream 1200742 15259377 ~ 15261518 (-)
LOC103042179 NA coding upstream 1206473 15265108 ~ 15303915 (-)
G184396 NA non-coding downstream 122417 13928106 ~ 13928313 (-)
G184354 heatr5b non-coding downstream 214312 13834781 ~ 13836418 (-)
G184338 NA non-coding downstream 320787 13724758 ~ 13729943 (-)
G184330 NA non-coding downstream 372952 13676337 ~ 13677778 (-)
G184256 NA non-coding downstream 430894 13619632 ~ 13619836 (-)
G184422 LOC104965148,LOC104966956,LOC103385808 non-coding upstream 69893 14128528 ~ 14131095 (-)
LOC111195216 NA non-coding upstream 121470 14180105 ~ 14185344 (-)
G184447 NA non-coding upstream 277311 14335946 ~ 14336641 (-)
LOC111195232 NA non-coding upstream 894809 14953444 ~ 15001573 (-)
LOC103043324 NA non-coding upstream 989112 15047747 ~ 15052870 (-)
LOC103031091 map3k11,LOC108427450,LOC108260854,LOC107748023 other downstream 10485 13988809 ~ 14040245 (-)
LOC111195226 NA other downstream 455977 13551132 ~ 13594753 (-)
LOC111195225 NA other downstream 747050 13226333 ~ 13303680 (-)
G184051 NA other downstream 1854072 12195212 ~ 12196658 (-)
gtf2a1l NA other downstream 2639086 11402707 ~ 11411644 (-)
LOC103032041 NA other upstream 5009 14063644 ~ 14116456 (-)
trnas-gcu_5 NA other upstream 31071 14089706 ~ 14089787 (-)
trnas-gcu_6 NA other upstream 32874 14091509 ~ 14091590 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other upstream 1250874 15309509 ~ 15340580 (-)
smim18 smim18 other upstream 1318023 15376658 ~ 15381208 (-)

Expression


Co-expression Network