lurap1l (lurap1l)


Basic Information

Item Value
gene id lurap1l
gene name lurap1l
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 14187676 ~ 14198597 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007230178.3
AGCGGTGAGTGCGCAGGCGCGCTGTGTGAGCGAGCGGGTGAGTGAGTGTATATCAGAGCTGACTGGTCATCAGTCTGACCGGTTCTGTCACTTCATGTGTCCGCGTTGAACCTGCGTGACAAACTGGCTCAGCTCTACAGAAGATTTTGGCAGAGTTAGGAGTGTGTTAGACAGTTTTCCACCTGAAGCTGCAGCAGGAGCGCTAAACGTTACCTGGCCGGTCCACCTCCTGAGCTCACCTTGGAGccatggaggaggaggagagcacCGCGCAGGACTTCAAGGAGATAGAGCAGAAGCTGGGTCGTAAAGTCCCCCAGAGTTTAGTTCGCTCTATCGCGGAGCACAAAGGCAAGGTCGAGTCCAGACTCACCAGCCCATCCAGAAAacactccagcagcagcagcagcaccaacCAGGACCTGAAACGCCTGGAGAGCAAGATGATACTCCTCAAGCAGGAAATGGCAAATCTCCGTGCCATCGACGTCAAGCTGATGCAGCAGCTCCTGTCTATCAACGAGGGCATCGAGTCCATCCGCTGGGTGATGGACGAGCGCGGGGGCGTGGCCAGCCGAGAGAGCAGCTTGAATGGCAGCTTGTACAGTCTAACAGACAGTCCGGATGCATCTCTGCATGGTAGCTTTAGCAGCCTCCATGACAGGACTGACGAATTGGATGGGATTTCAGTGGGCAGTTATCTGGACACTCTAGGGGAGGACTTGGCTGATCACCCGTCACCCACTGAACTGTCAGGCAGCTTCAGCGATAAACCCATCATTGAGGATGATACGTTTAAGAAATCCCCTCTTCGGCCGAGAGTGGACTCGGATGAGTACTACTGTTTCGGATAACGCTCCAGAGGTGGATTGCAGTCGATGACGGGGTattttctgctgctgctttagaATCAGAAAATGGTCAAAGTGGACTGTGAGTACAGGACTGAAGAACCGAAGAGCAGAGAGTAGTTCAGAACTAGCCATTAGCATCTACTTCTACTGATTCTCTCACTGTGAGGTCAGCATCTATTGGCTGGATGACAGAAAGCCACCAAGCCAAAGAcgtgttcaataaaaaaagctaCAGTAACCTTACAGTAACcattgcacacccctaatacATCCTTTCCACAGCATTATCACCATTTCTTCCAAAGTACAACATTTGgacatgtactgtatatctttAAGGAGTGTTCACTCATTGTTCTTAATTGAAACattgtcttattttatttcccATTCATTAATCTGTGTAGACTTTGGGGTTTATGGAATTATTTGCCCTGCTACATAGTCCCACAGTTGAAACACAAAATAATTCAGTTAATGTTGAtgtcattagcattagcatgcaaAGAGATTACACAAGATTTATCTTGGTGAAACAAGGGAACCAAAcaaaagaatacaaaataagtTCTAGTAACCttcataaatacaaaaacatggtaaatgtcATGGAATATGAGCTTCATTACAAGacagcacctcacaacttatacagttaAAATTGTGGGGGTTTCCAAGCCGTCTCCTTTTGTAACACGTCCTAATCAGTTTACCTGCTGTCTCATGTCTTTTGGCATAGCAGTGTACCTCCTTCTTACAGTTCCAGTCACACCATGCCCACTTTATTTTAACCTGAACTGAACGTAGATTTTCACACACGCTTCCCAAACTGCAGTGGAGTGTTAACATCTGTCTAATGTGTTCTATATGTGGCTTCAAAGGGATAAATACCACGCCTCTCTCTGCACTTCAAGGTCACCGGAGCTTCGATTTGAAGTGCAATTTCAGCTCATGCCAAAGTTTCTTCTTAatgtcataaaataaaaaaatgtcataaaataGACTGAATATCTGTTGGACACTTTCAGCAGGCAGAGTCACAGCTGAGTTGTCTTGATGAAAGTGCGAACACTGTTTAATTAACTGAAACTTGAGGTTTTGTTTATCAACTTTTTTtgatattctgattttttttttttactgtgtactttcTCTGATACCCACTAAAGACCTTGCAGAAATCTTACTGTTAGTTTTTCCAATGATTCTGGAGTTGTGTGTTTTAAGTGAGCGTGTGGtgtgtaattccatatgttccTATTGTACTGAATAATACCCAACTTGtgttttttctaatttattacagttttgatcgtttgtaaactgtattttttggtgaaaatgttttaatatattgtgttttctgCTTACA

Function

symbol description
lurap1l Predicted to be involved in positive regulation of I-kappaB kinase/NF-kappaB signaling.

NR:

description
leucine rich adaptor protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007230178.3 True 2226 mRNA 0.44 2 14187676 14198597

Neighbor

gene id symbol gene type direction distance location
drap1 drap1,LOC106608686 coding downstream 129041 14050730 ~ 14058635 (-)
LOC103028152 NA coding downstream 359777 13813398 ~ 13827899 (-)
LOC103027614 LOC103027614 coding downstream 380347 13799521 ~ 13807329 (-)
mpdz mpdz coding downstream 1308656 12816580 ~ 12879020 (-)
LOC103046990 rasgrp2,LOC108427446,LOC108261011,LOC106608563 coding downstream 1426745 12707652 ~ 12760931 (-)
LOC103033946 tyrp1,tyrp-1,LOC108260967,LOC105903131 coding upstream 1626 14200223 ~ 14207686 (-)
LOC103042598 crgm2,LOC103042598,LOC108427435,LOC108427436,LOC108260664,LOC108260584,LOC108260580,LOC108441183,LOC108260581 coding upstream 140117 14338714 ~ 14340598 (-)
LOC103043225 NA coding upstream 1060780 15259377 ~ 15261518 (-)
LOC103042179 NA coding upstream 1066511 15265108 ~ 15303915 (-)
LOC103041667 ldb2b,LOC108434309,LOC107562611,LOC107750444,LOC108260957,LOC107548319,LOC107671914,LOC107702407 coding upstream 1133538 15332135 ~ 15352286 (-)
LOC111195216 NA non-coding downstream 2332 14180105 ~ 14185344 (-)
G184422 LOC104965148,LOC104966956,LOC103385808 non-coding downstream 56581 14128528 ~ 14131095 (-)
G184396 NA non-coding downstream 259363 13928106 ~ 13928313 (-)
G184354 heatr5b non-coding downstream 351258 13834781 ~ 13836418 (-)
G184338 NA non-coding downstream 457733 13724758 ~ 13729943 (-)
G184447 NA non-coding upstream 137349 14335946 ~ 14336641 (-)
LOC111195232 NA non-coding upstream 754847 14953444 ~ 15001573 (-)
LOC103043324 NA non-coding upstream 849150 15047747 ~ 15052870 (-)
G184818 NA non-coding upstream 1174175 15372772 ~ 15379206 (-)
G184816 gtf2e2,LOC107671915,LOC107548363 non-coding upstream 1186117 15384714 ~ 15387101 (-)
LOC103032041 NA other downstream 71220 14063644 ~ 14116456 (-)
trnas-gcu_6 NA other downstream 96086 14091509 ~ 14091590 (-)
trnas-gcu_5 NA other downstream 97889 14089706 ~ 14089787 (-)
LOC103031091 map3k11,LOC108427450,LOC108260854,LOC107748023 other downstream 147431 13988809 ~ 14040245 (-)
LOC111195226 NA other downstream 592923 13551132 ~ 13594753 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other upstream 1110912 15309509 ~ 15340580 (-)
smim18 smim18 other upstream 1178061 15376658 ~ 15381208 (-)
smim14 smim14 other upstream 1467514 15666111 ~ 15671954 (-)
lrat lrat other upstream 2699581 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 3031488 17230085 ~ 17241027 (-)

Expression


Co-expression Network