LOC103041363 (qdpr,dhpr,qdprb1,LOC108437732,LOC107750446,LOC107702409,LOC107562607)


Basic Information

Item Value
gene id LOC103041363
gene name qdpr,dhpr,qdprb1,LOC108437732,LOC107750446,LOC107702409,LOC107562607
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 15367109 ~ 15372437 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007230210.3
GAGGAGCCATTAAGaaaattttaagtttataaatgtttgatcatttttttatatactgaaaatatatgtatatatttccttAGCACAGACATTGCATGTTTTAGTActgaaactgtaattctaaaagcTTTAAACTCCAGTTTTACGTCTTTAAACTATAAgtgttaaaaccttttttttgctCTGACTGTAACTCATGCATCATCAGCTAgcgctaaataaaataaataaacgcttaaaataaatcactaatatatgagtttcacatttgaactgaatacagaaataaagtaacttttcaataatattaaaattgtttGACCACAAATTAATGTAACTTATTTGTAAAGGGATTTCATTTAAAgaaaactctctctctgtctttaaaGTGCTGTTGTTATAGTGTGGCTCCGGCCTGATAGGGGGCGATCAGAGCACACTGAGCTCAGAGCTGTAaacacacgcactcacacagacacagtggGGATACAGGCTGATTACTCTACTCATTTCCCTTTGAATATCTCTACACCTGTGTTTCCCGAAGCTGCAGGAGTGTAGTACAGCATGGCAGCGGCTCAGAAGGTGATTATTTACGGGGGTAAAGGAGCTCTGGGCTCGAAGTGTGTGCAGTACTTCCGATCCAAACACTGGTGGGTTGCCTGCATTGATTTAAATGTGAATGAAGAAGCAAGTGCCAATGTCACCGTCAAGATGACCGACTCGTTTACTGAGCAAGCCAACCAAGTTACAGCTGATATTGGTGAACTTTTGGGGGAAGAGAAGGTTGACGctattttgtgtgtggctgGAGGCTGGGCAGGGGGCAGTGCCAAGGCCAAAGcTCTGTATAAGAATGCCGACTTGATGTGGAAGCAAAGTGTGTGGACGTCCACCATCTCCAGTCACCTAGCAACCAAACATCTGAAGGAGGGGGGGCTGCTCACACTCACGGGCGCTAAAGCGTCACTCGAACCGACCCCAgGTATGATTGGCTATGGCATGGCAAAGGCTGCAGTTCATCAGTTGTGTCAGAGTCTGGGTGGAGCTAACAGTGGACTTCCTGCTGGAGCTAGTGCCATTGCCATCCTACCAGTTACTCTGGACACGCCCATGAACAGACAGTTCATGCCAGATGCTGATGTCAGTGCCTGGACACCGTTGGAGTATGTAGCTGAATTGCTCTATAAGTGGGCAGTGGGAGAGGAGAGACCAGCGTCTGGAAGTCTTGTGCAGCTGGTCACCACAGACAGCAAGACGGAGGCAACAGTGCTGTAACTGCAGATAggggtgtgtgtttctgtgtgtgtgtgtgtgcacttgcctgtgtgtgtgtgtgagtatgtgtgtgtgagagagaaagagagagagaaagagagagcatggAAATCATTCTTTATTCTGCAATACTATCTGATACTGTGCTGGAAATTCTGTGGATATGTAAATGTACGGTATATTGTGATAATCATCACCTGTTAActtgaataaaaacacaatccCGGTTAACAAAAACAAGAATTCATCAGAAATGCCAACCTTTGTCATATTgattaacatactgtaacataagAACATGTATGTGAAGAGAAAAGttataataagaaaaaatggATCTAAACCGTCTTAATcatcacaaatgtttttttttttttttttttttttttagctgagtAATGACTTGACCAATTTTGGTCACAACGTACTGCAGTCATTCAGTCTTTTTACAGAGCCTAGTGCAAGTATTTTAAcgtttttggcattttttttttgctgaatttaGCAATTATTCAGCCTATGTCAATACAGTCTTGCTACCGCTCAGAAGTTCAGAAGATGTTTTGCATTAATGTTGTTGACCTTTTTGAAATTCAACTTTTACTTGAACATGGTTTCCAAAGGACAAATTGTGTTCAAAGCTGAACAAAgatacaattaaacaaacacatttgaatataaataaaatcttattGTAATGATCTTA
>XM_022681994.1
gctGTGTCCGATCCACTTGTACCAACACAACACCCggtaacacctcatacaccaacaccatgtcagtgtcaccacccaaataatagcagTCGTCTGGTGGTGCTATGGGATCCTAACCATTGtggaacagggtgaaaggaggattaATGTATAAAGTATGCAAAGAAACCGATACAGGACTACAATCTGTAATTTTAGAGCTATAAAGGGCTAAATGATGATTAGTGGAGTTGATGAGTTGGACAGTGTAGAAGATGGTGGTGTTAATGTGGGAGATGGTAGTGTAGGACatggtggtgttaatgttatggctgatcagtgtatataCAGGCTTTTCTTTGAACAGTAGGAGGCAGAGCAGAGATATTGTATGAACACTAAGCAGACAGAGGGAATAGTGCACAGGCACACTCAATTCTGAATGGAGCTATCCCACAACTTCTGCTAAAGATGTGATGTAACTGTTCTTCTTCTGGGTTCTTCTTCTGTTTCGGAAGAGCCACTTCAAACTGCAGGAGTGTAGTACAGCATGGCAGCGGCTCAGAAGGTGATTATTTACGGGGGTAAAGGAGCTCTGGGCTCGAAGTGTGTGCAGTACTTCCGATCCAAACACTGGTGGGTTGCCTGCATTGATTTAAATGTGAATGAAGAAGCAAGTGCCAATGTCACCGTCAAGATGACCGACTCGTTTACTGAGCAAGCCAACCAAGTTACAGCTGATATTGGTGAACTTTTGGGGGAAGAGAAGGTTGACGctattttgtgtgtggctgGAGGCTGGGCAGGGGGCAGTGCCAAGGCCAAAGcTCTGTATAAGAATGCCGACTTGATGTGGAAGCAAAGTGTGTGGACGTCCACCATCTCCAGTCACCTAGCAACCAAACATCTGAAGGAGGGGGGGCTGCTCACACTCACGGGCGCTAAAGCGTCACTCGAACCGACCCCAgGTATGATTGGCTATGGCATGGCAAAGGCTGCAGTTCATCAGTTGTGTCAGAGTCTGGGTGGAGCTAACAGTGGACTTCCTGCTGGAGCTAGTGCCATTGCCATCCTACCAGTTACTCTGGACACGCCCATGAACAGACAGTTCATGCCAGATGCTGATGTCAGTGCCTGGACACCGTTGGAGTATGTAGCTGAATTGCTCTATAAGTGGGCAGTGGGAGAGGAGAGACCAGCGTCTGGAAGTCTTGTGCAGCTGGTCACCACAGACAGCAAGACGGAGGCAACAGTGCTGTAACTGCAGATAggggtgtgtgtttctgtgtgtgtgtgtgtgcacttgcctgtgtgtgtgtgtgagtatgtgtgtgtgagagagaaagagagagagaaagagagagcatggAAATCATTCTTTATTCTGCAATACTATCTGATACTGTGCTGGAAATTCTGTGGATATGTAAATGTACGGTATATTGTGATAATCATCACCTGTTAActtgaataaaaacacaatccCGGTTAACAAAAACAAGAATTCATCAGAAATGCCAACCTTTGTCATATTgattaacatactgtaacataagAACATGTATGTGAAGAGAAAAGttataataagaaaaaatggATCTAAACCGTCTTAATcatcacaaatgtttttttttttttttttttttttttagctgagtAATGACTTGACCAATTTTGGTCACAACGTACTGCAGTCATTCAGTCTTTTTACAGAGCCTAGTGCAAGTATTTTAAcgtttttggcattttttttttgctgaatttaGCAATTATTCAGCCTATGTCAATACAGTCTTGCTACCGCTCAGAAGTTCAGAAGATGTTTTGCATTAATGTTGTTGACCTTTTTGAAATTCAACTTTTACTTGAACATGGTTTCCAAAGGACAAATTGTGTTCAAAGCTGAACAAAgatacaattaaacaaacacatttgaatataaataaaatcttattGTAATGATCTTA

Function

symbol description
qdpr Predicted to enable 6,7-dihydropteridine reductase activity; NADH binding activity; and NADPH binding activity. Predicted to be involved in L-phenylalanine catabolic process and tetrahydrobiopterin biosynthetic process. Located in cytoplasm. Implicated in phenylketonuria.
dhpr Predicted to enable 6,7-dihydropteridine reductase activity; NADH binding activity; and NADPH binding activity. Predicted to be involved in L-phenylalanine catabolic process and tetrahydrobiopterin biosynthetic process. Predicted to be active in cytoplasm. Is expressed in several structures, including adult head; adult heart; embryonic/larval fat body; embryonic/larval midgut; and extended germ band embryo. Human ortholog(s) of this gene implicated in phenylketonuria. Orthologous to human QDPR (quinoid dihydropteridine reductase).

NR:

description
dihydropteridine reductase

GO:

id name namespace
GO:0044237 cellular metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004155 6,7-dihydropteridine reductase activity molecular_function
GO:0050662 obsolete coenzyme binding molecular_function

KEGG:

id description
K00357 QDPR; dihydropteridine reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007230210.3 True 1984 mRNA 0.40 7 15367109 15371868
XM_022681994.1 False 1946 mRNA 0.43 8 15367109 15372437

Neighbor

gene id symbol gene type direction distance location
LOC103041667 ldb2b,LOC108434309,LOC107562611,LOC107750444,LOC108260957,LOC107548319,LOC107671914,LOC107702407 coding downstream 14823 15332135 ~ 15352286 (-)
LOC103042179 NA coding downstream 63194 15265108 ~ 15303915 (-)
LOC103043225 NA coding downstream 105591 15259377 ~ 15261518 (-)
LOC103042598 crgm2,LOC103042598,LOC108427435,LOC108427436,LOC108260664,LOC108260584,LOC108260580,LOC108441183,LOC108260581 coding downstream 1026511 14338714 ~ 14340598 (-)
LOC103033946 tyrp1,tyrp-1,LOC108260967,LOC105903131 coding downstream 1159423 14200223 ~ 14207686 (-)
LOC103043828 LOC108437730 coding upstream 55956 15428393 ~ 15560832 (-)
rfc1 rfc1,LOC102787736 coding upstream 243657 15616094 ~ 15630005 (-)
rpl9 rpl9,LOC107671920,LOC107700291,LOC107709470 coding upstream 259817 15632254 ~ 15637092 (-)
ugdh ugdh,LOC107757604 coding upstream 272701 15645138 ~ 15659566 (-)
pds5a pds5a,LOC107757607 coding upstream 312379 15684816 ~ 15707540 (-)
LOC103043324 NA non-coding downstream 314239 15047747 ~ 15052870 (-)
LOC111195232 NA non-coding downstream 365536 14953444 ~ 15001573 (-)
G184447 NA non-coding downstream 1030468 14335946 ~ 14336641 (-)
LOC111195216 NA non-coding downstream 1181765 14180105 ~ 14185344 (-)
G184422 LOC104965148,LOC104966956,LOC103385808 non-coding downstream 1236014 14128528 ~ 14131095 (-)
G184818 NA non-coding upstream 335 15372772 ~ 15379206 (-)
G184816 gtf2e2,LOC107671915,LOC107548363 non-coding upstream 12277 15384714 ~ 15387101 (-)
LOC111195235 NA non-coding upstream 40230 15412667 ~ 15419207 (-)
G184836 NA non-coding upstream 192185 15564622 ~ 15564883 (-)
G184853 NA non-coding upstream 288230 15660667 ~ 15664885 (-)
LOC103043525 tapt1,LOC108434341,LOC107702406,LOC107750443,LOC107671913,LOC105908524 other downstream 26529 15309509 ~ 15340580 (-)
LOC103032041 NA other downstream 1250653 14063644 ~ 14116456 (-)
trnas-gcu_6 NA other downstream 1275519 14091509 ~ 14091590 (-)
trnas-gcu_5 NA other downstream 1277322 14089706 ~ 14089787 (-)
LOC103031091 map3k11,LOC108427450,LOC108260854,LOC107748023 other downstream 1326864 13988809 ~ 14040245 (-)
smim18 smim18 other upstream 4221 15376658 ~ 15381208 (-)
smim14 smim14 other upstream 293674 15666111 ~ 15671954 (-)
lrat lrat other upstream 1525741 16898178 ~ 16901684 (-)
LOC103032582 NA other upstream 1857648 17230085 ~ 17241027 (-)
G185295 NA other upstream 1879830 17252267 ~ 17254633 (-)

Expression


Co-expression Network