cfap97


Basic Information

Item Value
gene id cfap97
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 3323761 ~ 3336839 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007232794.3
CCGCGTGCCTGGGGAGAGGAGGAAGTGACGTTGCTTAGTTACCGTAGCTAGACAACCCACACACTCTGCTGCTTTGAGAGTTCACGAGCTAAGTTAGGCTAGGCTAAAttaagctaagctaggctaagtGTAGCCCTGTCAAACCAGACGGCTGCGATTCTGAGCTGTTTTAAGGAGAAACGAGCAGAAATGACGATTATACGTGGTTATTCTGCGAAGCTGGACGCGGCAGAACACATAGGATGATGGTTTAAGGGTTAAAGTGTCGAAAGAGGGTCCATCAGAAAGAAGGATCAAGCGATGTTTAGCCCAAAAGAGCTGGAGGGGGAGGTGGATCATTCCTTCTTTGACAGTGATGGGGAGGCTGGAAAGGTGGTACATCAGTGTCCAGAGGAGACTCAAAACCCCCAATTAGAAAGAAGCACTGAGGAGGATGGAAAGCTGGAAGCAGAAAACCAGGGTCGAGAAAGCAAGGAGTTAGAAGAGGAAACACTGAAGGAAGATTTGTCCCACCTTCGCATTCAGAGTGAACCTGATGGTCACTCTAAATGGACTAGTGAAGCAAAAGAGAATCCGTCTGGGAACAATGTTGTGAAAGATAAAGAAGGGCCGGAATCTGGAAGAGAGGATTCTGATGCCTCTTCCAGGAAATCCTCATCATTGCCAAGCTCTGATAGGTCGAAATCCAGGAAAGGAAGCCGGTCAGATGACTTGTCCAGCGTCCGCTCCTACTCTTCCCTTGACTCGCATTCTGATTCCTCGCCTGAGGATGGAGAAGATGAGGCTGTTTTGAAAAATGATGATGAAAGTGAGAgtgatgaaagagagaaaactctGGAACGTCCGCTCATAAAACGCCATTCAGAAACCTCCAGAAAGTCCCCAGGAAAGTTTCGAAACAGGAGTCGCAGCCATTCACCATCATCATCGTCAACGTCATCCGAATGTGAAAGTTCCAACGGTGGTGATGGAAGAAGACCGGGTCTCTCACACAAACCGTCTTTCACCCAGGCGACCTCTTCACCACGCCGATGGCCTAGGTCAAGTTCggccaatcagagagagagagtgaaagtgtcAGACACTGTCGAATCTGAAGATACGGTAACCGATGTTACTCCTCTCTCCACTCCAGACATTAGTCCAGGCCAGTCATTCGATCTGACCTCGCTCACTGAACCCACGGTAACAGCTGCTGTGCAAGAGCAGGAGATTGTTACCAAGGAACCGTCAGTGACTGAAGTGGATTCGGAAAAGAGGAGGAGCTCAGACACGGATGGAGAAGAGAGATCAGCAGTGCTGAGTGCAGGGAGAAGGGTGGACAGCGCCCTGGTCATCACCAGCCCCAGCAGTGCGTCCAGCAGTAGTTGTATTAGCCACCGTCAAAAGAACTACTCCTTCACCAACGATGAGGTGCAGCGGATCGAACGTGAAAATCAGAGACTTCTGAGGGAGCTCTCTCGCTCTTCTCCACGCTTACGAAGAGAAGGGTCCGCCTGCTCAGCAGCTGCTGTCACCCAACATGGTGATCCCCCCACTGCTCGCATGTACCACAGTGCTCTCAATAGGCAGCGAGAGCAACAGCGCATCCAGCGAGAGAATCTGGCCCTTCTGAAGCGTCTGGAGTCAGTGAAGCCCACTCGAGGAATGACCCGAGCAGAGCAGCTAGCAGACTATCAGCGCCAGGCAGGATATCTCGGAATACCCGCCCCACTTTCCAGACCCCCTTCAGGAAAAGGATCCAGACCCTGTAGTTCAAACAGCCCTCGCAAAGCAAGATCTGAAACGGCGAAGTCCAGTAGATCCACAGCTTCACCGCCGGCCTGGTCCTAAATTTATGTTGACTGATGCTAGGTGTAAATCATAAGTGTAGGTTTCCAGCATTTATCTTTAGGTACATGGAAGTCCTCTTAACCTTCTTGATTGTTTTTGATTGTCATTACAGGAACTTTGAGAGCCTATTGTTACTaagttaatgaggtcctgcaagcAGTGGCCCTGTGCTTTTTGAACACACACTCTGCTCTGGTgcatttcagcaggacaatgctcgtccacacactgctgcagttTTATAGGCTTGtctactgcaaaatctgcaggaaatgTGTGAGAATATTTGAGCTGCATGGGATTAAATTAAATGTCTGGCATCCAACACTCTTTCTTTAATGATGAGTGCATATTAGACATTCTCAAACATAAGTCCTAGCTGTCCTTGATTTACACATAATACTCACAGCTCAACTCATAAAGGACTTGACAATCAGCTGCTGAGTTAATTTAGATGTGTCAAAGCTACTACAGGCCTACCATATGATTACGACAAAGACCCATGGCTTAACTGATCCTAGATCTTTATATTGAAGCTATAAAGCACTGTACATTGCACTCTTAACTGTTTTAGAAACATATGTAGAGTATAGTATATAGTTTTCACAGCtcaaagatgtttaaaatacatTCCCTAAAGAGCTGAAGAGCTAAACAGACTGTGCCTATCTTTGTGCAGCTTAATACAGAGCCTTTATCCTTACCCTTGGCGTGTTTGACGTTTGAATATATGATAAATATAGACGTATGAGTTTAAACAGATAGTTTACGTTGTGGTGTTGACTGTCATTAGAGCATATGTGTGTTGATAATACTGttgaaaagacaaaaatatatatttgatattgttTTGGTATtgaaaagtaaataataaaataaagtaatttat
>XM_007232795.3
CGCGTGCCTGGGGAGAGGAGGAAGTGACGTTGCTTAGTTACCGTAGCTAGACAACCCACACACTCTGCTGCTTTGAGAGTTCACGAGCTAAGTTAGGCTAGGCTAAAttaagctaagctaggctaagtGTAGCCCTGTCAAACCAGACGGCTGCGATTCTGAGCTGTTTTAAGGAGAAACGAGCAGAAATGACGATTATACGTGGTTATTCTGCGAAGCTGGACGCGGCAGAACACATAGGATGATGGTTTAAGGGTTAAAGTGTCGAAAGAGGGTCCATCAGAAAGAAGGATCAAGCGATGTTTAGCCCAAAAGAGCTGGAGGGGGAGGTGGATCATTCCTTCTTTGACAGTGATGGGGAGGCTGGAAAGGTGGTACATCAGTGTCCAGAGGAGACTCAAAACCCCCAATTAGAAAGAAGCACTGAGGAGGATGGAAAGCTGGAAGCAGAAAACCAGGGTCGAGAAAGCAAGGAGTTAGAAGAGGAAACACTGAAGGAAGATTTGTCCCACCTTCGCATTCAGAGTGAACCTGATGGTCACTCTAAATGGACTAGTGAAGCAAAAGAGAATCCGTCTGGGAACAATGTTGTGAAAGATAAAGAAGGGCCGGAATCTGGAAGAGAGGATTCTGATGCCTCTTCCAGGAAATCCTCATCATTGCCAAGCTCTGATAGGTCGAAATCCAGGAAAGGAAGCCGGTCAGATGACTTGTCCAGCGTCCGCTCCTACTCTTCCCTTGACTCGCATTCTGATTCCTCGCCTGAGGATGGAGAAGATGAGGCTGTTTTGAAAAATGATGATGAAAGTGAGAgtgatgaaagagagaaaactctGGAACGTCCGCTCATAAAACGCCATTCAGAAACCTCCAGAAAGTCCCCAGGAAAGTTTCGAAACAGGAGTCGCAGCCATTCACCATCATCATCGTCAACGTCATCCGAATGTGAAAGTTCCAACGGTGGTGATGGAAGAAGACCGGGTCTCTCACACAAACCGTCTTTCACCCAGGCGACCTCTTCACCACGCCGATGGCCTAGGTCAAGTTCggccaatcagagagagagagtgaaagtgtcAGACACTGTCGAATCTGAAGATACGGTAACCGATGTTACTCCTCTCTCCACTCCAGACATTAGTCCAGGCCAGTCATTCGATCTGACCTCGCTCACTGAACCCACGGTAACAGCTGCTGTGCAAGAGCAGGAGATTGTTACCAAGGAACCGTCAGTGACTGAAGTGGATTCGGAAAAGAGGAGGAGCTCAGACACGGATGGAGAAGAGAGATCAGTGCTGAGTGCAGGGAGAAGGGTGGACAGCGCCCTGGTCATCACCAGCCCCAGCAGTGCGTCCAGCAGTAGTTGTATTAGCCACCGTCAAAAGAACTACTCCTTCACCAACGATGAGGTGCAGCGGATCGAACGTGAAAATCAGAGACTTCTGAGGGAGCTCTCTCGCTCTTCTCCACGCTTACGAAGAGAAGGGTCCGCCTGCTCAGCAGCTGCTGTCACCCAACATGGTGATCCCCCCACTGCTCGCATGTACCACAGTGCTCTCAATAGGCAGCGAGAGCAACAGCGCATCCAGCGAGAGAATCTGGCCCTTCTGAAGCGTCTGGAGTCAGTGAAGCCCACTCGAGGAATGACCCGAGCAGAGCAGCTAGCAGACTATCAGCGCCAGGCAGGATATCTCGGAATACCCGCCCCACTTTCCAGACCCCCTTCAGGAAAAGGATCCAGACCCTGTAGTTCAAACAGCCCTCGCAAAGCAAGATCTGAAACGGCGAAGTCCAGTAGATCCACAGCTTCACCGCCGGCCTGGTCCTAAATTTATGTTGACTGATGCTAGGTGTAAATCATAAGTGTAGGTTTCCAGCATTTATCTTTAGGTACATGGAAGTCCTCTTAACCTTCTTGATTGTTTTTGATTGTCATTACAGGAACTTTGAGAGCCTATTGTTACTaagttaatgaggtcctgcaagcAGTGGCCCTGTGCTTTTTGAACACACACTCTGCTCTGGTgcatttcagcaggacaatgctcgtccacacactgctgcagttTTATAGGCTTGtctactgcaaaatctgcaggaaatgTGTGAGAATATTTGAGCTGCATGGGATTAAATTAAATGTCTGGCATCCAACACTCTTTCTTTAATGATGAGTGCATATTAGACATTCTCAAACATAAGTCCTAGCTGTCCTTGATTTACACATAATACTCACAGCTCAACTCATAAAGGACTTGACAATCAGCTGCTGAGTTAATTTAGATGTGTCAAAGCTACTACAGGCCTACCATATGATTACGACAAAGACCCATGGCTTAACTGATCCTAGATCTTTATATTGAAGCTATAAAGCACTGTACATTGCACTCTTAACTGTTTTAGAAACATATGTAGAGTATAGTATATAGTTTTCACAGCtcaaagatgtttaaaatacatTCCCTAAAGAGCTGAAGAGCTAAACAGACTGTGCCTATCTTTGTGCAGCTTAATACAGAGCCTTTATCCTTACCCTTGGCGTGTTTGACGTTTGAATATATGATAAATATAGACGTATGAGTTTAAACAGATAGTTTACGTTGTGGTGTTGACTGTCATTAGAGCATATGTGTGTTGATAATACTGttgaaaagacaaaaatatatatttgatattgttTTGGTATtgaaaagtaaataataaaataaagtaatttat
>XM_022681676.1
ACATTGTACGAAAAAGGAGTTTGACCCCATCTTCTCTCCTAAAAGGCTTTATTTCCCCTCAATTTTGAAAACGTTGGACCATTGCTGGGAGTGTCGAAAGAGGGTCCATCAGAAAGAAGGATCAAGCGATGTTTAGCCCAAAAGAGCTGGAGGGGGAGGTGGATCATTCCTTCTTTGACAGTGATGGGGAGGCTGGAAAGGTGGTACATCAGTGTCCAGAGGAGACTCAAAACCCCCAATTAGAAAGAAGCACTGAGGAGGATGGAAAGCTGGAAGCAGAAAACCAGGGTCGAGAAAGCAAGGAGTTAGAAGAGGAAACACTGAAGGAAGATTTGTCCCACCTTCGCATTCAGAGTGAACCTGATGGTCACTCTAAATGGACTAGTGAAGCAAAAGAGAATCCGTCTGGGAACAATGTTGTGAAAGATAAAGAAGGGCCGGAATCTGGAAGAGAGGATTCTGATGCCTCTTCCAGGAAATCCTCATCATTGCCAAGCTCTGATAGGTCGAAATCCAGGAAAGGAAGCCGGTCAGATGACTTGTCCAGCGTCCGCTCCTACTCTTCCCTTGACTCGCATTCTGATTCCTCGCCTGAGGATGGAGAAGATGAGGCTGTTTTGAAAAATGATGATGAAAGTGAGAgtgatgaaagagagaaaactctGGAACGTCCGCTCATAAAACGCCATTCAGAAACCTCCAGAAAGTCCCCAGGAAAGTTTCGAAACAGGAGTCGCAGCCATTCACCATCATCATCGTCAACGTCATCCGAATGTGAAAGTTCCAACGGTGGTGATGGAAGAAGACCGGGTCTCTCACACAAACCGTCTTTCACCCAGGCGACCTCTTCACCACGCCGATGGCCTAGGTCAAGTTCggccaatcagagagagagagtgaaagtgtcAGACACTGTCGAATCTGAAGATACGGTAACCGATGTTACTCCTCTCTCCACTCCAGACATTAGTCCAGGCCAGTCATTCGATCTGACCTCGCTCACTGAACCCACGGTAACAGCTGCTGTGCAAGAGCAGGAGATTGTTACCAAGGAACCGTCAGTGACTGAAGTGGATTCGGAAAAGAGGAGGAGCTCAGACACGGATGGAGAAGAGAGATCAGCAGTGCTGAGTGCAGGGAGAAGGGTGGACAGCGCCCTGGTCATCACCAGCCCCAGCAGTGCGTCCAGCAGTAGTTGTATTAGCCACCGTCAAAAGAACTACTCCTTCACCAACGATGAGGTGCAGCGGATCGAACGTGAAAATCAGAGACTTCTGAGGGAGCTCTCTCGCTCTTCTCCACGCTTACGAAGAGAAGGGTCCGCCTGCTCAGCAGCTGCTGTCACCCAACATGGTGATCCCCCCACTGCTCGCATGTACCACAGTGCTCTCAATAGGCAGCGAGAGCAACAGCGCATCCAGCGAGAGAATCTGGCCCTTCTGAAGCGTCTGGAGTCAGTGAAGCCCACTCGAGGAATGACCCGAGCAGAGCAGCTAGCAGACTATCAGCGCCAGGCAGGATATCTCGGAATACCCGCCCCACTTTCCAGACCCCCTTCAGGAAAAGGATCCAGACCCTGTAGTTCAAACAGCCCTCGCAAAGCAAGATCTGAAACGGCGAAGTCCAGTAGATCCACAGCTTCACCGCCGGCCTGGTCCTAAATTTATGTTGACTGATGCTAGGTGTAAATCATAAGTGTAGGTTTCCAGCATTTATCTTTAGGTACATGGAAGTCCTCTTAACCTTCTTGATTGTTTTTGATTGTCATTACAGGAACTTTGAGAGCCTATTGTTACTaagttaatgaggtcctgcaagcAGTGGCCCTGTGCTTTTTGAACACACACTCTGCTCTGGTgcatttcagcaggacaatgctcgtccacacactgctgcagttTTATAGGCTTGtctactgcaaaatctgcaggaaatgTGTGAGAATATTTGAGCTGCATGGGATTAAATTAAATGTCTGGCATCCAACACTCTTTCTTTAATGATGAGTGCATATTAGACATTCTCAAACATAAGTCCTAGCTGTCCTTGATTTACACATAATACTCACAGCTCAACTCATAAAGGACTTGACAATCAGCTGCTGAGTTAATTTAGATGTGTCAAAGCTACTACAGGCCTACCATATGATTACGACAAAGACCCATGGCTTAACTGATCCTAGATCTTTATATTGAAGCTATAAAGCACTGTACATTGCACTCTTAACTGTTTTAGAAACATATGTAGAGTATAGTATATAGTTTTCACAGCtcaaagatgtttaaaatacatTCCCTAAAGAGCTGAAGAGCTAAACAGACTGTGCCTATCTTTGTGCAGCTTAATACAGAGCCTTTATCCTTACCCTTGGCGTGTTTGACGTTTGAATATATGATAAATATAGACGTATGAGTTTAAACAGATAGTTTACGTTGTGGTGTTGACTGTCATTAGAGCATATGTGTGTTGATAATACTGttgaaaagacaaaaatatatatttgatattgttTTGGTATtgaaaagtaaataataaaataaagtaatttat

Function

NR:

description
cilia- and flagella-associated protein 97 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007232794.3 True 2722 mRNA 0.46 5 3323761 3336839
XM_007232795.3 False 2718 mRNA 0.46 5 3323762 3336839
XM_022681676.1 False 2550 mRNA 0.46 5 3324596 3336839

Neighbor

gene id symbol gene type direction distance location
ufsp2 ufsp2,LOC107579280 coding upstream 22312 3290784 ~ 3301449 (+)
LOC103042722 pdli3,LOC103042722,LOC108415769 coding upstream 38787 3274886 ~ 3284974 (+)
LOC103043954 LOC108413760 coding upstream 57649 3177632 ~ 3266112 (+)
LOC103022435 LOC108441326 coding upstream 176491 3011671 ~ 3147270 (+)
LOC103030587 sgcz,LOC107656592,LOC107702328 coding upstream 388370 2668923 ~ 2935391 (+)
LOC103039527 NA coding downstream 7698 3344537 ~ 3380543 (+)
LOC103038692 acsl1,acsl1a,LOC107562746,LOC107702334 coding downstream 62352 3399191 ~ 3437044 (+)
LOC103037633 NA coding downstream 187357 3524196 ~ 3535052 (+)
LOC103037959 NA coding downstream 199524 3536363 ~ 3550525 (+)
pcdh18 LOC108413018 coding downstream 478564 3815403 ~ 3827765 (+)
G182363 NA non-coding upstream 12290 3306318 ~ 3311471 (+)
G182351 NA non-coding upstream 54543 3230888 ~ 3269218 (+)
G182353 NA non-coding upstream 63065 3258879 ~ 3260696 (+)
G182343 NA non-coding upstream 208063 3114887 ~ 3115698 (+)
G182334 NA non-coding upstream 344395 2979053 ~ 2979366 (+)
G182374 slc25a4,LOC107656452,LOC107562743 non-coding downstream 689 3337528 ~ 3339816 (+)
G182396 NA non-coding downstream 141452 3478291 ~ 3480416 (+)
LOC111195151 NA non-coding downstream 155625 3492464 ~ 3498694 (+)
G182492 NA non-coding downstream 189441 3526280 ~ 3526973 (+)
G182507 NA non-coding downstream 323390 3660229 ~ 3660492 (+)
G182361 NA other upstream 33503 3287938 ~ 3290258 (+)
G182356 NA other upstream 64911 3256367 ~ 3258850 (+)
LOC111195173 NA other upstream 754467 2525683 ~ 2569294 (+)
LOC103029952 fgf20,fgf20a,LOC108412830,LOC103364653,LOC108432889,LOC107747399,LOC107721420,LOC107554387,LOC107702330,LOC107657011 other upstream 863089 2457564 ~ 2460672 (+)
G181818 NA other upstream 2931631 391614 ~ 392130 (+)
G182577 pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 other downstream 1033078 4369917 ~ 4431946 (+)
LOC103029349 NA other downstream 1598744 4935583 ~ 4941134 (+)
G182790 NA other downstream 2090028 5426867 ~ 5427255 (+)
G183001 pgm2 other downstream 2705849 6042688 ~ 6048474 (+)
pax5 pax5 other downstream 2913935 6250774 ~ 6367190 (+)

Expression


Co-expression Network