LOC103026105 (LOC103353182,LOC103469355,LOC103137796,LOC106954674,LOC102796940,LOC102236590)


Basic Information

Item Value
gene id LOC103026105
gene name LOC103353182,LOC103469355,LOC103137796,LOC106954674,LOC102796940,LOC102236590
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 12979 ~ 23966 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681587.1
CCCACAGTTAGACTGTCCCGGAGAGCTTAGTGCGGCACAGTGAGGGTACAGAGGGAGCAGCAGGGATGTCGGGCTGCAGGATCTGGAACCGGGAGCACGAGCTGCCAGTCTATCTGGCCAATCCCGTCACTCGCTTCCAGCACCAAGCCACCCGGGAGAGGGCACAGGAATGCCCCATCACTGACCTGCAGAGCAGCTGCGCCAGCTCAGCCAGCAAAGCCGGCAGCACCCAATTCGAGCAGAGCTTAGAGGAGCAGGACAGCACCAACCAGCAGCACGGTGGCGGCGGGATGTCAGACACAGGAATCCAGAACAGCCAAAACCTTCTACACCACATgggtgagCAGTTGCTGATTAAAGGGGGGCGAGTGGTTAATGATGATCAGTCGTTTTATGCTGATGTTTATGTGGAGGATGGAGTCATCAGGCAGGTGGGGGAAAACCTCATTGTGCCCGGTGGGGTGAGGGTGGTGGAGGCGGATGGTCGCATGGTGATTCCTGGAGGAATCGACACCAACACCTGCCTGCACAAAGACTACCTGGGCAGTCTGCCGGTGGACGACTTTTTCCAGGGGACCAAAGCAGCACTGGCTGGAGGAACCACCATGATCATTGATCATGTGACCCCTCAGCCCGGAGCCAGTCTGCTGCATGCGTTTGAGCAGTGGCAGGCAGCAGCGGACAGGAAGTGCTGCTGTGATTACTCGCTGCATGTGGACATCCCGCAGTGGGACGGGGGCGTGAAGGACGAGCTGGAGGTGCTGGTGCAGGAGAAAGgaATAAACTCATTCCAGGTTTACATGGCCTACAAAGATTTGTTCCAAATGACAAACAGTCAGttgtatGAGGCTTTATCATGTTTGAGAGATTTAGGCGCAGTTGTGTTGGTTCATGCGGAGAACGGAGATCTAGTAGCACAGgaACAGAAGAAGATCTTGTCAATGGGCATCACTGGGCCAGAGGGTCACCCCCTCAGCCATCCAGAAGAGCTTGAGGCGGAGGCTGTGTTTCGCGCTATCACGATCGGCAACCAGGTCAACTGCCCCATCTACATCACCCGTGTGATGAGTAAAACTGCAGCGGACACTCTGGCCCAGGCCCGCAGGAAAGGCTGTGTGGTGTTTGGAGAGCCTCTAACGGCAAGTCTGGCCACAGATGGTTCGCACTACTGGAGCAGGAACTGGGCCAAGGCAGCAGCCTATGTCATCTCCCCACCACTCAGCCCGGACCCCACCACCCCCCAGCACCTACACACCATGCTCACGTGTGGGGACCTGCAGGTGGTGGGCAGTGGTCACTGTGCTTACAGCACGGCCCAGAAGGCCATTGGGAAAGATAACTTCACCCTGATCCCTGAAGGAACCAATGGAGTGGAGGAGCGAATGGGCTTCGTCTGGGACAGAGCAgtggcTCTTGGGAAAATGGATGAGAACCAGTTTGTTGCTGTGACGAGCACCAACGCTGCCAAACTCTTCAACCTGTACCCCCGTAAGGGACGCATCGCCGTAGGGTCAGACGCTGACATCGTCATTTGGGATCCGGACCACGTTAAAACCATTACAGCCAAACTCCAGCAATCTgcTCTGGAGTATAATATCTTTGAGGGGATGGAGTGTAGGGGTGTTCCTGTGTTTGTGATCAGTCAGGGACGGGTGGTGTACGAAGACGGAAAGCTGAATGTCCAGCAGGGAACTGGCCGCTTCATCCCACGGAAACCGTTTCCTGACCACGCCTACCAGCGCATCAACACCCGCAACAAGGTCACACTCCTACACCCACACCACTCATAAACttctatctggatgggattcgTTACTCAGGGG
>XM_022681588.1
CCCACAGTTAGACTGTCCCGGAGAGCTTAGTGCGGCACAGTGAGGGTACAGAGGGAGCAGCAGGGATGTCGGGCTGCAGGATCTGGAACCGGGAGCACGAGCTGCCAGTCTATCTGGCCAATCCCGTCACTCGCTTCCAGCACCAAGCCACCCGGGAGAGGGCACAGGAATGCCCCATCACTGACCTGCAGAGCAGCTGCGCCAGCTCAGCCAGCAAAGCCGGCAGCACCCAATTCGAGCAGAGCTTAGAGGAGCAGGACAGCACCAACCAGCAGggtgagCAGTTGCTGATTAAAGGGGGGCGAGTGGTTAATGATGATCAGTCGTTTTATGCTGATGTTTATGTGGAGGATGGAGTCATCAGGCAGGTGGGGGAAAACCTCATTGTGCCCGGTGGGGTGAGGGTGGTGGAGGCGGATGGTCGCATGGTGATTCCTGGAGGAATCGACACCAACACCTGCCTGCACAAAGACTACCTGGGCAGTCTGCCGGTGGACGACTTTTTCCAGGGGACCAAAGCAGCACTGGCTGGAGGAACCACCATGATCATTGATCATGTGACCCCTCAGCCCGGAGCCAGTCTGCTGCATGCGTTTGAGCAGTGGCAGGCAGCAGCGGACAGGAAGTGCTGCTGTGATTACTCGCTGCATGTGGACATCCCGCAGTGGGACGGGGGCGTGAAGGACGAGCTGGAGGTGCTGGTGCAGGAGAAAGgaATAAACTCATTCCAGGTTTACATGGCCTACAAAGATTTGTTCCAAATGACAAACAGTCAGttgtatGAGGCTTTATCATGTTTGAGAGATTTAGGCGCAGTTGTGTTGGTTCATGCGGAGAACGGAGATCTAGTAGCACAGgaACAGAAGAAGATCTTGTCAATGGGCATCACTGGGCCAGAGGGTCACCCCCTCAGCCATCCAGAAGAGCTTGAGGCGGAGGCTGTGTTTCGCGCTATCACGATCGGCAACCAGGTCAACTGCCCCATCTACATCACCCGTGTGATGAGTAAAACTGCAGCGGACACTCTGGCCCAGGCCCGCAGGAAAGGCTGTGTGGTGTTTGGAGAGCCTCTAACGGCAAGTCTGGCCACAGATGGTTCGCACTACTGGAGCAGGAACTGGGCCAAGGCAGCAGCCTATGTCATCTCCCCACCACTCAGCCCGGACCCCACCACCCCCCAGCACCTACACACCATGCTCACGTGTGGGGACCTGCAGGTGGTGGGCAGTGGTCACTGTGCTTACAGCACGGCCCAGAAGGCCATTGGGAAAGATAACTTCACCCTGATCCCTGAAGGAACCAATGGAGTGGAGGAGCGAATGGGCTTCGTCTGGGACAGAGCAgtggcTCTTGGGAAAATGGATGAGAACCAGTTTGTTGCTGTGACGAGCACCAACGCTGCCAAACTCTTCAACCTGTACCCCCGTAAGGGACGCATCGCCGTAGGGTCAGACGCTGACATCGTCATTTGGGATCCGGACCACGTTAAAACCATTACAGCCAAACTCCAGCAATCTgcTCTGGAGTATAATATCTTTGAGGGGATGGAGTGTAGGGGTGTTCCTGTGTTTGTGATCAGTCAGGGACGGGTGGTGTACGAAGACGGAAAGCTGAATGTCCAGCAGGGAACTGGCCGCTTCATCCCACGGAAACCGTTTCCTGACCACGCCTACCAGCGCATCAACACCCGCAACAAGGTCACACTCCTACACCCACACCACTCATAAACttctatctggatgggattcgTTACTCAGGGGG

Function

NR:

description
PREDICTED: dihydropyrimidinase-related protein 1-like isoform X2

GO:

id name namespace
GO:0006208 pyrimidine nucleobase catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681587.1 True 1823 mRNA 0.56 13 12979 23965
XM_022681588.1 False 1761 mRNA 0.56 12 12979 23966

Neighbor

gene id symbol gene type direction distance location
LOC111195165 NA coding downstream 16100 40066 ~ 45653 (+)
LOC103030568 camk2d2,LOC107714220,LOC107742503,LOC107563926 coding downstream 41915 65881 ~ 107890 (+)
LOC103027206 NA coding downstream 178342 202308 ~ 207014 (+)
LOC111195167 NA coding downstream 221500 245466 ~ 247320 (+)
LOC103031511 NA coding downstream 226510 250476 ~ 256183 (+)
G181750 NA non-coding downstream 3449 27415 ~ 28989 (+)
LOC111195166 NA non-coding downstream 69199 93165 ~ 93769 (+)
G181777 NA non-coding downstream 139663 163629 ~ 166044 (+)
G181775 NA non-coding downstream 183780 207746 ~ 208523 (+)
G181782 rps6kb2,LOC108413157,LOC108260512,LOC103368287,LOC104930044,LOC101478146,LOC102204811 non-coding downstream 187869 211835 ~ 231061 (+)
G181779 cd027,LOC108413410 other downstream 167991 191957 ~ 199996 (+)
G181799 NA other downstream 252705 276671 ~ 278173 (+)
G181801 NA other downstream 258110 282076 ~ 286281 (+)
LOC111195149 NA other downstream 265044 289010 ~ 390166 (+)
LOC111195150 NA other downstream 276129 300095 ~ 306312 (+)

Expression


Co-expression Network