LOC111195167


Basic Information

Item Value
gene id LOC111195167
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 245466 ~ 247320 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681619.1
tagcttcagattagatcatcactacacacctccaaactacaTGTAGCTTCCTTTCACTGGAAAAAGGAATAGATACGTAAATGAATTTTCACTTATTATAACTCAAATGTCTTTGTTTTTGCTCACAGCTCATCAGTTTGACCATCATGAAAAGGAAGGTGACTCTGTCTTGCTGAATCTGGTCATGCAGCCACCGGTGATGGTGCATTTCACCAGTGCGAGTAAGGACACTACAGAGGTTTGGATTTGCACCATCACGAAAAAAGGAGTTCACTGCAAGAGCGGCTACGATCACCGAGCCTCCATCGTGAATGCGTCTCTGATGCTGAGTCAGCTGACAGTGGCAGACAGAGGAACGTACACCGTCGTAGACATCAATACATCGGAAGTCTTTGCTTTTCACCAGCTAGAGGTTAttgATATGCCCTCTGCCAAGTTTCCAGTTGTTGCTTTAGTATCATGCGGGCTTCTTGTGGCAGTTGTCTGTGCATTTGCTCTGGGGGCCTGCTGTCGAAAGCGAAAGCAACAGCAGCAAAGGCAGCCCAGGCACGAGATGAGAGGCTCTGACGATGAGACGGTCCAGCTCTCAGTTCAGCAAAGTGAAAGCAGTTACAGACCACCAATTCCATGGATTGAGAAGAAAcaaaacaaccaaccaatctTAGAAGATCCAGAAGAGGAAGGCTCCTGTTCCACCCAGGCTACTGCTGATCAAGAGATACAAAATGAACAAAGCTAAAGCAGCAGCTTGGCTAATTGTTGTGCGAGTTTTtgtctaacttttttttgtgtaacgtgttttttgtgtgttaagtTTTAACttaagagagtgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681619.1 True 834 mRNA 0.45 2 245466 247320

Neighbor

gene id symbol gene type direction distance location
LOC103027206 NA coding upstream 38452 202308 ~ 207014 (+)
LOC103030568 camk2d2,LOC107714220,LOC107742503,LOC107563926 coding upstream 137576 65881 ~ 107890 (+)
LOC111195165 NA coding upstream 199813 40066 ~ 45653 (+)
LOC103026105 LOC103353182,LOC103469355,LOC103137796,LOC106954674,LOC102796940,LOC102236590 coding upstream 221500 12979 ~ 23966 (+)
LOC103031511 NA coding downstream 3156 250476 ~ 256183 (+)
LOC111195169 NA coding downstream 11571 258891 ~ 264780 (+)
LOC103032143 NA coding downstream 60357 307677 ~ 315123 (+)
LOC103032759 NA coding downstream 78316 325636 ~ 329837 (+)
LOC103042564 si:dkey-22i16.2,LOC108260510,LOC108434387,LOC107746771,LOC107674260,LOC107556780 coding downstream 84810 332130 ~ 341442 (+)
G181782 rps6kb2,LOC108413157,LOC108260512,LOC103368287,LOC104930044,LOC101478146,LOC102204811 non-coding upstream 14405 211835 ~ 231061 (+)
G181775 NA non-coding upstream 36943 207746 ~ 208523 (+)
G181777 NA non-coding upstream 79422 163629 ~ 166044 (+)
LOC111195166 NA non-coding upstream 151697 93165 ~ 93769 (+)
G181750 NA non-coding upstream 216477 27415 ~ 28989 (+)
G181797 NA non-coding downstream 21382 268702 ~ 269257 (+)
G181798 NA non-coding downstream 24234 271554 ~ 273833 (+)
G181800 NA non-coding downstream 32245 279565 ~ 279790 (+)
G181802 NA non-coding downstream 35049 282369 ~ 282804 (+)
G181811 NA non-coding downstream 85260 332580 ~ 333245 (+)
G181779 cd027,LOC108413410 other upstream 45470 191957 ~ 199996 (+)
G181799 NA other downstream 29351 276671 ~ 278173 (+)
G181801 NA other downstream 34756 282076 ~ 286281 (+)
LOC111195149 NA other downstream 41690 289010 ~ 390166 (+)
LOC111195150 NA other downstream 52775 300095 ~ 306312 (+)
G181818 NA other downstream 144294 391614 ~ 392130 (+)

Expression


Co-expression Network