LOC103031511


Basic Information

Item Value
gene id LOC103031511
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 250476 ~ 256183 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681620.1
CTACGATGACCTCATGACTTCAGGTGGCTTTAAATCCCTGTTAAAAAGGAGCATAAACCTCAGTGTTTAGGACTAATATGAGTCGGGTTTAGGGTTTTACTCATCCGCTATTCCTGGGGAAAGGGATTCTGCACAGGAAAAAACAACAGTCCGGCAGACAAGGGTCCATTCATCCAGGCCACAACATTAATCAGACACAAACAAAGCGTGAACTAATACACCTGGATTAGCATGCACAAGTCATTAGCATGAGATAGCTCTGCAGGCCCAATAAAAGACCGCTGGAGAGCCCAGACCAGTACAGAAGATCTGAAACCTCCTGAGGATTCACACACTGAGAGACTACAACAAAATGAAGTGCATTGTTTTCATCGCCTTCCTGGCTTCAGCAGCCTATatgacCTCAGCAAAGAAACTGCTGGTGGTCGGCGGTTTGAACGGTGCTGGTCTGGTGACTGGTCTTAATGGTGGCTTGGTCACTGGTCTTAATGGTGGCTTGGTCACTGGTCTTAATGGTGGCTTGGTCACTGGCCTTAATCCTGGCTTGCTGGGCCAGGGGCTGGTGGTTGGAGGGCTGAACCCAGCGCTGATCCCTGCTGGTGGCGCTGTAATCGGACAGACCCCATTCGCTCAGATGCTGCCTGGTATGTCTCCATTCATGATCCAGAATCCAATGGCTGCTCCATTTGGGGCACCCAACCCTCAGGTGCCAATGCCTCCACAGCCTGCAATGGGCTTCCCACCCATGGGACTGCCATACCTTGCGCCCCAAAACCCTGCCCTGCGCCAGATGCTGCCTCCTCAGCAGCAAGCAGCGGGCGGTATGAACCCAATGGGAAACGGACAGCAGCCACAGGGAGACATGCCTGCTGGCCCAGTGCCACGATTCAGGCGAACACTGCTCAGGAGAATGCAGGCCAAATCAACTAACACCAACCCTGAggTCACACCAACCCCAACTGTATCGAGCACCCTGATGAACTGATGAGctttttttccagagaagcTGGAGGTGTTTCAggaaattcacactgttctcattttcatCAATGTGAAATCATGAAAATCAGGGAAGAAAATAATGTGACAAACACTGTGTTCCTTTTCTTGACTAGTTAGAAAAATCGTTATTGTACTTTAATGATTAGACTTTCAAATAAATCTTTGTGCATCAAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681620.1 True 1180 mRNA 0.49 10 250476 256183

Neighbor

gene id symbol gene type direction distance location
LOC111195167 NA coding upstream 3156 245466 ~ 247320 (+)
LOC103027206 NA coding upstream 43462 202308 ~ 207014 (+)
LOC103030568 camk2d2,LOC107714220,LOC107742503,LOC107563926 coding upstream 142586 65881 ~ 107890 (+)
LOC111195165 NA coding upstream 204823 40066 ~ 45653 (+)
LOC103026105 LOC103353182,LOC103469355,LOC103137796,LOC106954674,LOC102796940,LOC102236590 coding upstream 226510 12979 ~ 23966 (+)
LOC111195169 NA coding downstream 2708 258891 ~ 264780 (+)
LOC103032143 NA coding downstream 51494 307677 ~ 315123 (+)
LOC103032759 NA coding downstream 69453 325636 ~ 329837 (+)
LOC103042564 si:dkey-22i16.2,LOC108260510,LOC108434387,LOC107746771,LOC107674260,LOC107556780 coding downstream 75947 332130 ~ 341442 (+)
tacr3 tacr3a,tacr3,LOC108411976,LOC107552719,LOC107746781,LOC107674253,LOC107556806 coding downstream 122045 378228 ~ 426514 (+)
G181782 rps6kb2,LOC108413157,LOC108260512,LOC103368287,LOC104930044,LOC101478146,LOC102204811 non-coding upstream 19415 211835 ~ 231061 (+)
G181775 NA non-coding upstream 41953 207746 ~ 208523 (+)
G181777 NA non-coding upstream 84432 163629 ~ 166044 (+)
LOC111195166 NA non-coding upstream 156707 93165 ~ 93769 (+)
G181750 NA non-coding upstream 221487 27415 ~ 28989 (+)
G181797 NA non-coding downstream 12519 268702 ~ 269257 (+)
G181798 NA non-coding downstream 15371 271554 ~ 273833 (+)
G181800 NA non-coding downstream 23382 279565 ~ 279790 (+)
G181802 NA non-coding downstream 26186 282369 ~ 282804 (+)
G181811 NA non-coding downstream 76397 332580 ~ 333245 (+)
G181779 cd027,LOC108413410 other upstream 50480 191957 ~ 199996 (+)
G181799 NA other downstream 20488 276671 ~ 278173 (+)
G181801 NA other downstream 25893 282076 ~ 286281 (+)
LOC111195149 NA other downstream 32827 289010 ~ 390166 (+)
LOC111195150 NA other downstream 43912 300095 ~ 306312 (+)
G181818 NA other downstream 135431 391614 ~ 392130 (+)

Expression


Co-expression Network