cpe (cpe,LOC107745061,LOC107548348,LOC107591555)


Basic Information

Item Value
gene id cpe
gene name cpe,LOC107745061,LOC107548348,LOC107591555
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 8801144 ~ 8846414 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022681782.1
agagagatatacagcagcagcaggaggaggagagatagaggtagagaggtagagagagtcgGTCCTCGGTCACGGAGCGGTCGGTGTTACTCAGCGAGCTGAGAGTCAGAGCGAGCCCGAGAGAGAGACGCTGATCTGCGGCCAGTCATGTCGGCGGCGGCGGTGTTGTTGAGCTGCGCGGCGGCGGCGGTGCTGCTGGTGGTCGCGGCCCCGGGCGGAGCGgctgcggcggcggcggcggagaGGACCGGAGGCAGCGGCGGGATCTCCTTCGAGTACCACCGCTACGAGGAGCTGCGGAAGGCGCTGGTGGCCGTGTGGCTGCAGTGCCCGTCCATCAGCCGCATCTACACGGTGGGGGAGAGCAGCGAGGGCCgcgagctgctggtgctggagatCAGCGACAACCCGGGGGTGCACGAGCCcgGTGAGCCGGAGTTTAAGTACATCGGGAACATGCACGGGAACGAAGCCGTGGGCAGGGAGCTGCTGATCTACCTGGCCCAGTACCTGTGTAACGAGTACCAGCAGGGCAACGACACCATCATCAACTTGATCCACTCCACGCGCATCCACATCATGCCCTCCATGAACCCCGACGGCTTTGAGAAAGCCGCCTCTCAGTCTGGGGAGATGAAGGACTGGTTCGTGGGTCGCACCAACGCTCAGGGTATCGACCTGAACCGCAACTTTCCTGACCTGGACCGCATCGTCTACATGAACGAGCGAGAGGGAGGAGCCAACAACCACCTGCTGAAAAACATGAAGAAAGCAGTGGATGAAAACACCAAGCTCGCCCCCGAGACGAAGGCGGTGATTCACTGGATCATGGACATTCCGTTCGTGTTGTCCGCCAACCTTCACGGAGGAGACGTGGTGGCCAACTACCCGTACGATGAAACCCGCAGTGGCTCCACCCATGAATACAGTGCCAGCCCTGACGACATGGTGTTTAAGTTGGCCAAGGCGTACTCCGTCTACAACCCTGTGATGTCGGACCCCAAGAGGGCGCCCTGCCGCAAGAATGACGACGACTCCAGTTTTAAAGAGGGTATCACTAACGGAGGGGCCTGGTACAGCGTGCCTGGAGgCATGCAGGACTTCAACTATCTGAGCAGTAACTGTTTCGAGATCACGCTGGAGCTGAGCTGCGACAAGTTTCCTCCAGAGAACACCCTCAAAATGTACTGGGACCAGAACCGCAACTCCCTCATCAACTACTTAGAGCAGGTTCATCGTGGAGTTGCAGGTTTTGTTCGTGACCTTCAGGGCAATCCCATCTCCAATGCCTCTGTTTCTGTGGAGGGCATCGACCATGATTTAACCACAGCTAAGGATGGTGATTACTGGCGTTTATTGACTCCCGGGAACTACAAAGTTTCTGCTTCGGCTCCTGGATATCTGACTGTAATCAAGAAAGTGGCCGTCTCCAGCACCACTGCTACTCGGCTGGATTTTGAGTTGGAGTCTCTGGAGGAgcggaaggaggaggagaaggaggagcttATGGATTGGTGGAAGATGATGTCGGAGACGCTCAACTTCTAAAACAGCCAAAACAGCCGCAACTGTCAGGTCCTGATGGGCGGAGGACCTCACGAGCATCCTgggtttaaaatatttcatcgtcatcatcgtcgttgttgttgttgttgttgttgtgtgtgtgctgaccCACTTTTTAGCTTATGTTTTGAGGGCACTACATCTGGACGGTTGGAATATTATGAATATTATGCATacgaatattaataatatatgtcaTGGACTGTGACAGTTAATGCTTACGAAAATAAGATCTTGCTTACAAAGTTTCTGGGCAGAATCGGTAATCTGGGGACGTTAGCATTTTTATAATGGGTATATGAAGTCTGATTGTAGCGCCCTCCAACGAAAACAGCGAGTGATGTCTTATCAATGggttcatttttcagcagataTTGACACATCTAGCTTACGTAGGTATTGTTGCTATACAACGTTAATTCTATACATTTACAATTGTCCACTATCTGCGTACGTGTCCTCATAAACACACAAagacaaacacataaacacacaaacacacgtacGCAGGTAGTGAATAACGTTAACGTTAATTTGCTAATGGTGTGATATAATTGATATAACTGGTCTAGCTTtacgttctttttttttagccacGTGCTCAGCATTATCGTTATCGTGAGGTGTTTTCGTAGCCACGCCCACCTCCTATTCCTCCTACACCAATcacaacaaaccaaccaaccagaaaGCACTGTGTCGTGAACGAATGTACGTACGTCCGCGTCCGCATCGAATCATATCGATCACTACAGATTGCGATTATGATTGTGACCAATCACGACTGAATCCAGTGTAGTATGTGGAAGCCTCTGAAAACTGAAGATATATTTATGCTTTTCGTCTCCTTTCTGTTGAAGCACTGTCCTGTGtaacttaatgttttatttttgacgTTTATTTGCTATTTCGAAAGGAGTCGCGTCGGCGATTCGCGTCTCATATCTAGTTTGAATGAATTTCTTGAATATTTAAGCTGATTGTGAGGAATGCTGAAGAGGTTCGTCAGTAAAAACTCTTTCACTTTATTATTAGAACTCTATAGGAACCtaagtaattattaaatattatagttCTAAgcttgtattattattgtatgtTCTGATTATTGTAAGTTACACTatgaatttaaaacatttgccATGGCACAAATTTGTGCAGGACGGTTATTTCTGTAAAGATAACGAGATATATACTGTAGAGCGATGAGTAGGATTTTGTAAACTATACCAAAATGCACAACtctttacactgcaaaaaaaaaaaaaaattatttgaataagcaaaatcctcttaattatagtgtaaatatcaataaatatctcattttgagattattattattattactgttattattattattattatagtaactTATTTCTAACTTACCTGTACTTGTTTTAATGCATAATGCAGATAATTTTGCATAATTTTAACTTATAATGCAAATATACTGGATTTACATTGTTTAATGTGTATTACTGTGTATTATCAAAATAGAATACAAAATTTGTACTTGTTTTAAGAAATATGaataacatgaattaatgcagaattgtttgcttgtttaaaaTTCTGCAAACAgttttcatattaaaaaaaaaaaagtggaaatttattttaatagtttaaaaaaattctgaCAAAATTGATTGTTCTGGAAAATAATTAGCttgttttttaaagttcttaagaAAGAATGCTGAACATGTAGCCTATTTAAGAAATAATGCAGGTAATATTTGGTATTTCGATATATAATACAGAAAATCTACTGAAATGTTTAAGCATTGTATTAACATGTAGTTTTGTTTATCAAAACATTTCTTGAAACAAGCATTTCAAATTATCTGCCAATGAAATTAGAttgtttttagtaaataaaGTTGCATAAaacaagtaatagaagttaGAAATAAGCTAAATTAACTTACACAAGTTTGAAAGCAgtataatcaggaaaaaaggagacatttcagatatttaaaCTACATTTTGGAGGATTTAGCTTgttaatatcatttatttcagtgtatttattGAACGCTCTGTAATATACCGATCTCGCACCTGTAATCTGTACATGTTTACCCTTccactatatactgtatgtatcatTAACAGGAGAgaagtatatatttaaagctacacaaaacaaaaagcacaCCCCTCTGCATTACATTAACACCTACAGCAGTGCATAGGTCCCCACTTTGCACTGGTCCCTGTACTGTAGGTGTAAATAGAAGGCCTGGGTTTTTACAGTTTagcaacactacacacaaatgcacatgtatatgcatacacacacaaacacacacacacacacacacacacacacacacacacatctcctgAAGTATTAATGAAGTCATAAATCTACTGAAACCTGGAAACGCTTCAGTACCTGTCTCCCATACAGAGCTTTAAGAGAAGATTCAGTCATATCAGAGTTTAACCCAAAGCCATAACTCTAAATATGATTTCAATAAAACAatgcttctgtttctctttctgaaATTTCAGTGGTATGTCCTCTATATGAATGTAATGATTATTTCAACTCAATTCTGCAGATCACAAAATAAACTTCCCTTTTCTGTTGTCA

Function

symbol description
cpe Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space. Is expressed in posterior pancreatic bud and retina. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human CPE (carboxypeptidase E).

NR:

description
PREDICTED: carboxypeptidase E isoform X2

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004181 metallocarboxypeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01294 CPE; carboxypeptidase E

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022681782.1 True 4177 mRNA 0.42 10 8801144 8846414

Neighbor

gene id symbol gene type direction distance location
msmo1 msmo1,LOC107750426,LOC107702386,LOC107655978 coding upstream 7237 8784880 ~ 8793907 (+)
klhl2 klhl2,LOC107655955,LOC107745059,LOC107591556,LOC107702385 coding upstream 22201 8752127 ~ 8778943 (+)
LOC103036243 LOC108439191 coding upstream 61281 8627354 ~ 8739863 (+)
LOC111195272 NA coding upstream 1286426 7512697 ~ 7514718 (+)
primpol NA coding upstream 1322877 7459929 ~ 7478267 (+)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 coding downstream 243869 9090283 ~ 9184039 (+)
LOC103047154 ndst3,LOC108439183,LOC108260488,LOC107591550,LOC107551574,LOC107702380,LOC107750457 coding downstream 622160 9468574 ~ 9650975 (+)
LOC111195203 LOC108411626 coding downstream 1009398 9855812 ~ 9865765 (+)
LOC111195273 NA coding downstream 1138198 9984612 ~ 9985691 (+)
LOC111195205 NA coding downstream 1149195 9995609 ~ 9996842 (+)
G183312 NA non-coding upstream 58171 8702426 ~ 8742973 (+)
G183293 NA non-coding upstream 1301662 7480385 ~ 7499482 (+)
G183289 ncapd3 non-coding upstream 1342440 7433978 ~ 7458704 (+)
G183251 wdr19 non-coding upstream 1384114 7411797 ~ 7417030 (+)
G183248 wdr19,LOC107591558 non-coding upstream 1403760 7394430 ~ 7397384 (+)
G183361 NA non-coding downstream 154441 9000855 ~ 9039749 (+)
G183376 NA non-coding downstream 334526 9180940 ~ 9512425 (+)
G183389 NA non-coding downstream 437195 9283609 ~ 9288142 (+)
G183391 NA non-coding downstream 458981 9305395 ~ 9306685 (+)
G183405 NA non-coding downstream 714296 9560710 ~ 9932597 (+)
G183215 NA other upstream 1584005 7214471 ~ 7217139 (+)
LOC103028013 LOC108410819,LOC107548356,LOC107655813,LOC107702399,LOC107709454,LOC107562618,LOC108260988 other upstream 1791221 6897480 ~ 7009923 (+)
LOC103036850 NA other upstream 2136381 6523213 ~ 6664763 (+)
rnf38 rnf38,LOC107551561 other upstream 2302952 6445263 ~ 6498192 (+)
pax5 pax5 other upstream 2433954 6250774 ~ 6367190 (+)
tll1 tll1,LOC107548346,LOC107745060,LOC107591552 other downstream 24423 8870837 ~ 8983969 (+)
G183387 NA other downstream 364920 9211334 ~ 9293703 (+)
LOC111195202 NA other downstream 992522 9838936 ~ 9844659 (+)
LOC111195140 NA other downstream 1218438 10064852 ~ 10072047 (+)
LOC111195207 LOC107375340,LOC106958509,LOC105896809,LOC107671222,LOC107690788 other downstream 1252132 10098546 ~ 10101547 (+)

Expression


Co-expression Network