LOC111195166


Basic Information

Item Value
gene id LOC111195166
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 93165 ~ 93769 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002651501.1
tcatggagagtaaagtagagtaatgcagagtgaggtaaagcgaggtagagtgaggcaaactaaggcagagtgaggtgaATGGAGGTAGAGCAAGATTGAGTTAGAGTCATGTAGAGTAAAGTGGAGTaatgcagagtgaggtagagtcatgcagagtaaagtagagtaatgcagagtgaggtagagtcatgcagagtaaagtagagtaatgcagagtgaggtaaagcgaggtagagtgaggcaaactAATGCAGAGTGAGGTGAATGGAGGTAGAGCAAGATTGAGTTAGAGTCATGTAGAGTAAAGTGGAGTaatgcagagtgaggtagagtcatgcagagtaaagtagagtaatgcagagtgaggtaaagcgaggtagagtgaggcaaactAATGCAGAGTGAGGTGAATTGAGGTAGAGCAAGACTGAGGTAGACTCATGTAGAGTGAGGAAGAAGATACACCAAAGAAACGTGAAGTAGAG

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002651501.1 True 485 lncRNA 0.44 2 93165 93769

Neighbor

gene id symbol gene type direction distance location
LOC111195165 NA coding upstream 47512 40066 ~ 45653 (+)
LOC103026105 LOC103353182,LOC103469355,LOC103137796,LOC106954674,LOC102796940,LOC102236590 coding upstream 69199 12979 ~ 23966 (+)
LOC103027206 NA coding downstream 108539 202308 ~ 207014 (+)
LOC111195167 NA coding downstream 151697 245466 ~ 247320 (+)
LOC103031511 NA coding downstream 156707 250476 ~ 256183 (+)
LOC111195169 NA coding downstream 165122 258891 ~ 264780 (+)
LOC103032143 NA coding downstream 213908 307677 ~ 315123 (+)
G181750 NA non-coding upstream 64176 27415 ~ 28989 (+)
G181777 NA non-coding downstream 69860 163629 ~ 166044 (+)
G181775 NA non-coding downstream 113977 207746 ~ 208523 (+)
G181782 rps6kb2,LOC108413157,LOC108260512,LOC103368287,LOC104930044,LOC101478146,LOC102204811 non-coding downstream 118066 211835 ~ 231061 (+)
G181797 NA non-coding downstream 174933 268702 ~ 269257 (+)
G181798 NA non-coding downstream 177785 271554 ~ 273833 (+)
G181779 cd027,LOC108413410 other downstream 98188 191957 ~ 199996 (+)
G181799 NA other downstream 182902 276671 ~ 278173 (+)
G181801 NA other downstream 188307 282076 ~ 286281 (+)
LOC111195149 NA other downstream 195241 289010 ~ 390166 (+)
LOC111195150 NA other downstream 206326 300095 ~ 306312 (+)

Expression


Co-expression Network