Gene
RNA
| Item | Value |
|---|---|
| gene id | G71702 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 3901282 ~ 3930277 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU81739 | False | 15374 | lncRNA | 0.38 | 2 | 3901282 | 3917302 |
| TU81741 | False | 14490 | lncRNA | 0.36 | 2 | 3914972 | 3930277 |
| TU81740 | False | 12734 | lncRNA | 0.35 | 3 | 3917472 | 3930277 |
| TU81742 | True | 12758 | lncRNA | 0.35 | 2 | 3917472 | 3930277 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_03875714_03882574 | NA | coding | downstream | 18708 | 3875082 ~ 3882574 (-) |
| CI01000012_03794143_03871728 | NA | coding | downstream | 28034 | 3793143 ~ 3873248 (-) |
| CI01000012_03771803_03792867 | ADGRB3 | coding | downstream | 108092 | 3771178 ~ 3793190 (-) |
| CI01000012_03729351_03731119 | NA | coding | downstream | 168817 | 3729175 ~ 3732465 (-) |
| CI01000012_03717828_03724221 | NA | coding | downstream | 175538 | 3717460 ~ 3725744 (-) |
| CI01000012_03963989_03965578 | NA | coding | upstream | 32896 | 3963173 ~ 3965740 (-) |
| CI01000012_04048205_04049218 | NA | coding | upstream | 115876 | 4046153 ~ 4049506 (-) |
| CI01000012_04375448_04378813 | NA | coding | upstream | 445081 | 4375358 ~ 4379404 (-) |
| CI01000012_04404769_04419096 | PHF3 | coding | upstream | 474049 | 4404326 ~ 4419096 (-) |
| CI01000012_04706769_04709074 | GPHB5 | coding | upstream | 776424 | 4706701 ~ 4709074 (-) |
| G71700 | NA | non-coding | downstream | 1357 | 3885415 ~ 3899925 (-) |
| G71780 | NA | non-coding | downstream | 137250 | 3763812 ~ 3764032 (-) |
| G71774 | NA | non-coding | downstream | 145187 | 3755820 ~ 3756095 (-) |
| G71773 | NA | non-coding | downstream | 148875 | 3752119 ~ 3752407 (-) |
| G71701 | NA | non-coding | upstream | 2655 | 3932932 ~ 3952980 (-) |
| G71784 | NA | non-coding | upstream | 51441 | 3981718 ~ 3981928 (-) |
| G71798 | NA | non-coding | upstream | 82641 | 4012918 ~ 4013133 (-) |
| G71801 | NA | non-coding | upstream | 86585 | 4016862 ~ 4017092 (-) |
| G71804 | NA | non-coding | upstream | 88950 | 4019227 ~ 4019556 (-) |
| G70774 | NA | other | downstream | 1034390 | 2866508 ~ 2866892 (-) |
| G69562 | NA | other | downstream | 2524984 | 1332075 ~ 1376298 (-) |
| CI01000012_01139864_01192154 | TTC7A | other | downstream | 2750084 | 1135676 ~ 1192154 (-) |
| G69332 | NA | other | downstream | 3125403 | 775364 ~ 775879 (-) |
| G69277 | NA | other | downstream | 3170817 | 729920 ~ 730465 (-) |
| G71898 | NA | other | upstream | 603253 | 4533530 ~ 4534672 (-) |
| G72068 | NA | other | upstream | 845943 | 4776220 ~ 4780132 (-) |
| G72204 | NA | other | upstream | 1363496 | 5293773 ~ 5302206 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | upstream | 1433365 | 5413369 ~ 5416780 (-) |
| G72294 | NA | other | upstream | 1532563 | 5462840 ~ 5465857 (-) |
