trnai-aau_13


Basic Information

Item Value
gene id trnai-aau_13
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 5175836 ~ 5175908 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnai-aau_13
GGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGCCa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-aau_13 True 73 tRNA 0.60 1 5175836 5175908

Neighbor

gene id symbol gene type direction distance location
mttp mttp,mtp,zgc:136353 coding upstream 35560 5116517 ~ 5140276 (+)
LOC103028729 LOC108415759 coding upstream 70497 5080398 ~ 5105339 (+)
LOC103028516 slc24a2,LOC103028516,LOC108441320,LOC108260852,LOC107665969 coding upstream 144155 4995777 ~ 5031681 (+)
LOC103030219 tsn5,tspan5b,LOC108441323,LOC107557938,LOC107692617,LOC107758863,LOC105893813,LOC103360687 coding upstream 194440 4971104 ~ 4981396 (+)
LOC103029042 chic2,LOC103029042,LOC108441324,LOC103353160,LOC101486940,LOC106602128 coding upstream 227736 4942421 ~ 4948100 (+)
trnai-aau_14 NA coding downstream 30178 5206086 ~ 5206159 (+)
LOC103023997 LOC108443450 coding downstream 39002 5214910 ~ 5229596 (+)
tdrd7 NA coding downstream 54872 5230780 ~ 5250916 (+)
tmod1 tmod1,LOC107665961 coding downstream 76783 5252691 ~ 5277721 (+)
gne gne,LOC107723184,LOC107692604 coding downstream 125097 5301005 ~ 5332451 (+)
G182730 NA non-coding upstream 138228 5036210 ~ 5037608 (+)
G182703 NA non-coding upstream 206158 4967011 ~ 4969678 (+)
G182690 NA non-coding upstream 286493 4885736 ~ 4889343 (+)
G182674 NA non-coding upstream 323775 4851503 ~ 4852061 (+)
G182673 NA non-coding upstream 324393 4850587 ~ 4851443 (+)
G182752 NA non-coding downstream 106440 5282348 ~ 5339331 (+)
G182791 NA non-coding downstream 251441 5427349 ~ 5427850 (+)
G182907 NA non-coding downstream 317934 5493842 ~ 5498366 (+)
G182911 NA non-coding downstream 367518 5543426 ~ 5559507 (+)
G182941 LOC107741621,LOC107559181,LOC107564376,LOC107559180,LOC108414272,LOC108414004 non-coding downstream 533744 5709652 ~ 5710340 (+)
LOC103029349 NA other upstream 234702 4935583 ~ 4941134 (+)
G182577 pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 other upstream 743890 4369917 ~ 4431946 (+)
G182361 NA other upstream 1885578 3287938 ~ 3290258 (+)
G182356 NA other upstream 1916986 3256367 ~ 3258850 (+)
LOC111195173 NA other upstream 2606542 2525683 ~ 2569294 (+)
G182790 NA other downstream 250959 5426867 ~ 5427255 (+)
G183001 pgm2 other downstream 866780 6042688 ~ 6048474 (+)
pax5 pax5 other downstream 1074866 6250774 ~ 6367190 (+)
rnf38 rnf38,LOC107551561 other downstream 1269355 6445263 ~ 6498192 (+)
LOC103036850 NA other downstream 1347305 6523213 ~ 6664763 (+)

Expression


Co-expression Network