trnai-aau_14


Basic Information

Item Value
gene id trnai-aau_14
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035917.1
NCBI id CM008320.1
chromosome length 21661149
location 5206086 ~ 5206159 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnai-aau_14
GGCCGGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-aau_14 True 74 tRNA 0.61 1 5206086 5206159

Neighbor

gene id symbol gene type direction distance location
trnai-aau_13 NA coding upstream 30178 5175836 ~ 5175908 (+)
mttp mttp,mtp,zgc:136353 coding upstream 65810 5116517 ~ 5140276 (+)
LOC103028729 LOC108415759 coding upstream 100747 5080398 ~ 5105339 (+)
LOC103028516 slc24a2,LOC103028516,LOC108441320,LOC108260852,LOC107665969 coding upstream 174405 4995777 ~ 5031681 (+)
LOC103030219 tsn5,tspan5b,LOC108441323,LOC107557938,LOC107692617,LOC107758863,LOC105893813,LOC103360687 coding upstream 224690 4971104 ~ 4981396 (+)
LOC103023997 LOC108443450 coding downstream 8751 5214910 ~ 5229596 (+)
tdrd7 NA coding downstream 24621 5230780 ~ 5250916 (+)
tmod1 tmod1,LOC107665961 coding downstream 46532 5252691 ~ 5277721 (+)
gne gne,LOC107723184,LOC107692604 coding downstream 94846 5301005 ~ 5332451 (+)
nans nansa,nans,LOC107723182,LOC107692601,LOC107758866,LOC107665955 coding downstream 130444 5336603 ~ 5346435 (+)
G182730 NA non-coding upstream 168478 5036210 ~ 5037608 (+)
G182703 NA non-coding upstream 236408 4967011 ~ 4969678 (+)
G182690 NA non-coding upstream 316743 4885736 ~ 4889343 (+)
G182674 NA non-coding upstream 354025 4851503 ~ 4852061 (+)
G182673 NA non-coding upstream 354643 4850587 ~ 4851443 (+)
G182752 NA non-coding downstream 76189 5282348 ~ 5339331 (+)
G182791 NA non-coding downstream 221190 5427349 ~ 5427850 (+)
G182907 NA non-coding downstream 287683 5493842 ~ 5498366 (+)
G182911 NA non-coding downstream 337267 5543426 ~ 5559507 (+)
G182941 LOC107741621,LOC107559181,LOC107564376,LOC107559180,LOC108414272,LOC108414004 non-coding downstream 503493 5709652 ~ 5710340 (+)
LOC103029349 NA other upstream 264952 4935583 ~ 4941134 (+)
G182577 pi4k2b,LOC107742490,LOC107702326,LOC107750041,LOC107656613 other upstream 774140 4369917 ~ 4431946 (+)
G182361 NA other upstream 1915828 3287938 ~ 3290258 (+)
G182356 NA other upstream 1947236 3256367 ~ 3258850 (+)
LOC111195173 NA other upstream 2636792 2525683 ~ 2569294 (+)
G182790 NA other downstream 220708 5426867 ~ 5427255 (+)
G183001 pgm2 other downstream 836529 6042688 ~ 6048474 (+)
pax5 pax5 other downstream 1044615 6250774 ~ 6367190 (+)
rnf38 rnf38,LOC107551561 other downstream 1239104 6445263 ~ 6498192 (+)
LOC103036850 NA other downstream 1317054 6523213 ~ 6664763 (+)

Expression


Co-expression Network