G71158


Basic Information

Item Value
gene id G71158
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4109941 ~ 4110276 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81127
AGAAAAACACAGAATTGTTGACATTTTTGCAGATTTATTAAAAAAGAAAAGCTGAAATATCACATGGTCCTAAGTATTCAGACCCTTTGCTGTGACACTCATATATTTAACTCAGGTGCTGTCCATTTCTTCTGATCATCCTTGAGATGGTTCTACACCTTCATTTGAGTCCAGCTGTGCTTGATTATACTGATTGGACTTGATTAGGAAAGCCACACACCTGTCTATATAAGACCTTACAGCTCACAGTGCATGTCAGAGCAAATGAGAATCATGAGGACAAAGGAACTGCCTGAAGAGCTCAGAGACAGAATTGTGGCAAGGCACAGATCTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81127 True 336 lncRNA 0.40 1 4109941 4110276

Neighbor

gene id symbol gene type direction distance location
CI01000012_04052923_04100797 NA coding upstream 8941 4052613 ~ 4101000 (+)
CI01000012_03989870_04006406 NA coding upstream 103346 3989711 ~ 4006595 (+)
CI01000012_03736684_03742335 LMBRD1 coding upstream 366875 3736636 ~ 3743066 (+)
CI01000012_03633636_03709136 LMBRD1 coding upstream 400805 3633636 ~ 3709136 (+)
CI01000012_03414617_03418724 NA coding upstream 690533 3414617 ~ 3419408 (+)
CI01000012_04179776_04184166 NA coding downstream 69500 4179776 ~ 4184450 (+)
CI01000012_04209791_04237026 NA coding downstream 98750 4209026 ~ 4237160 (+)
CI01000012_04266133_04266370 NA coding downstream 155857 4266133 ~ 4267426 (+)
CI01000012_04285964_04292319 NA coding downstream 175318 4285594 ~ 4293775 (+)
CI01000012_04371425_04373907 NA coding downstream 261149 4371425 ~ 4373991 (+)
G71156 NA non-coding upstream 2819 4106835 ~ 4107122 (+)
G71152 NA non-coding upstream 21699 4087869 ~ 4088242 (+)
G71145 NA non-coding upstream 42108 4067613 ~ 4067833 (+)
G71134 NA non-coding upstream 65706 4042982 ~ 4044235 (+)
G71305 NA non-coding downstream 128849 4239125 ~ 4239406 (+)
G71375 NA non-coding downstream 236528 4346804 ~ 4347380 (+)
G71238 NA non-coding downstream 371362 4481638 ~ 4505484 (+)
G71239 NA non-coding downstream 419080 4529356 ~ 4585221 (+)
CI01000012_04551570_04571150 SGPP1 non-coding downstream 434588 4551169 ~ 4571339 (+)
G70029 NA other upstream 1478556 2622478 ~ 2631385 (+)
G68725 NA other upstream 3425085 683523 ~ 684856 (+)
G68660 NA other upstream 3573988 535566 ~ 535953 (+)
CI01000012_00194370_00195347 HCAR1-3 other upstream 3904167 193903 ~ 195676 (+)
CI01000012_04424569_04425090 NA other downstream 309963 4424569 ~ 4425756 (+)
CI01000012_04495631_04501066 NA other downstream 388177 4495631 ~ 4501066 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 1066619 5176895 ~ 5180970 (+)
G71199 NA other downstream 1302974 5413250 ~ 5416785 (+)
G71218 NA other downstream 1425576 5535852 ~ 5538384 (+)

Expression


Co-expression Network