G71375


Basic Information

Item Value
gene id G71375
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4346804 ~ 4347380 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81357
ATACAGTGACTTGTTAACCTGATCTAGCTTCCGAGACCCCCCGGTACTGCCGCACGAGCGCGAGATCTTGCTTTCCTGCCGCAAGCGCACCTCTCTCTGCGTCTGCTGTTCAGTGAAAGAGAATTTGACTTGCCCGGCTTGACAAGGAGCCTGATTCAAAATGGAGTTTTTATAACTTGATACAGTTAAGCAAAATCACAGGACCAATGCTGTTTTCCTAAATACAATCACGATTAAAAACGTGACACTGATTTCATTACTGAATGATTCAGCATTTTGAACGAATCGGTTCAAAGATTCAATGACCTATTCATAAACAATTGCCTCATTCTTGAATGAATCAGCCATTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81357 True 351 lncRNA 0.42 2 4346804 4347380

Neighbor

gene id symbol gene type direction distance location
CI01000012_04285964_04292319 NA coding upstream 53029 4285594 ~ 4293775 (+)
CI01000012_04266133_04266370 NA coding upstream 79378 4266133 ~ 4267426 (+)
CI01000012_04209791_04237026 NA coding upstream 109644 4209026 ~ 4237160 (+)
CI01000012_04179776_04184166 NA coding upstream 162354 4179776 ~ 4184450 (+)
CI01000012_04052923_04100797 NA coding upstream 245804 4052613 ~ 4101000 (+)
CI01000012_04371425_04373907 NA coding downstream 24045 4371425 ~ 4373991 (+)
CI01000012_04386557_04402516 NA coding downstream 38823 4386203 ~ 4402975 (+)
CI01000012_04424569_04425090 NA coding downstream 77189 4424569 ~ 4425756 (+)
CI01000012_04436374_04437448 NA coding downstream 87900 4435280 ~ 4437599 (+)
CI01000012_04488201_04489863 NA coding downstream 140821 4488201 ~ 4489897 (+)
G71305 NA non-coding upstream 107398 4239125 ~ 4239406 (+)
G71158 NA non-coding upstream 236528 4109941 ~ 4110276 (+)
G71156 NA non-coding upstream 239682 4106835 ~ 4107122 (+)
G71152 NA non-coding upstream 258562 4087869 ~ 4088242 (+)
G71145 NA non-coding upstream 278971 4067613 ~ 4067833 (+)
G71238 NA non-coding downstream 134258 4481638 ~ 4505484 (+)
G71239 NA non-coding downstream 181976 4529356 ~ 4585221 (+)
CI01000012_04551570_04571150 SGPP1 non-coding downstream 197484 4551169 ~ 4571339 (+)
G71442 NA non-coding downstream 294157 4641537 ~ 4641848 (+)
G71208 NA non-coding downstream 359176 4706556 ~ 4710923 (+)
G70029 NA other upstream 1715419 2622478 ~ 2631385 (+)
G68725 NA other upstream 3661948 683523 ~ 684856 (+)
G68660 NA other upstream 3810851 535566 ~ 535953 (+)
CI01000012_00194370_00195347 HCAR1-3 other upstream 4141030 193903 ~ 195676 (+)
CI01000012_04495631_04501066 NA other downstream 151073 4495631 ~ 4501066 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 829515 5176895 ~ 5180970 (+)
G71199 NA other downstream 1065870 5413250 ~ 5416785 (+)
G71218 NA other downstream 1188472 5535852 ~ 5538384 (+)

Expression


Co-expression Network