G71971


Basic Information

Item Value
gene id G71971
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4506590 ~ 4507270 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU82056
TGCATATAAAAGATGTATTATCTGGCACAAATACAACAGAAATTGGACTGAATTAAAGACAAACGGAAAAACAGAGCGAGCGAAACAGATTTTGAATTATCAAAAAATCGTTAACATCATATAAAACAACAAAATATACTTCACAAAAAAACTAAACATTGTAACTAGCTACTCATGAACATGTCAATTTAAAAACAATAATTATTCATATAAAAATGTCAGTTTTTTTCACAAACATGAAATGTATTCTGAGGCCAAATATTAAAATACAAAATAAAATCATATAAAGAGCAGCCTTAAAAAAACATGTAAAATGTGAACTTTTAACCCAAGAACAGCAAAGTTTAAAATTACATGAAACAAATCAAATGAAACTGGATCTTGAGGCAAAAAAAAAAAAAATCACAATAGCTTTTAACACTGGGCGGCCCGCCAATCACAGTCCGTCCAGACGGTGGTGCTTAATGCTAAGTGAGATTGCTGCTCTTCTCAGGGTTCCAGTTGAATTTTTTCTTCCTTTTTTCCTGGTGCCTTCTCTTCTTTCACTGCACTCATACACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82056 True 562 lncRNA 0.32 2 4506590 4507270

Neighbor

gene id symbol gene type direction distance location
CI01000012_04404769_04419096 PHF3 coding downstream 87494 4404326 ~ 4419096 (-)
CI01000012_04375448_04378813 NA coding downstream 127186 4375358 ~ 4379404 (-)
CI01000012_04048205_04049218 NA coding downstream 457084 4046153 ~ 4049506 (-)
CI01000012_03963989_03965578 NA coding downstream 540850 3963173 ~ 3965740 (-)
CI01000012_03875714_03882574 NA coding downstream 624016 3875082 ~ 3882574 (-)
CI01000012_04706769_04709074 GPHB5 coding upstream 199431 4706701 ~ 4709074 (-)
CI01000012_04839741_04854323 NA coding upstream 332205 4839475 ~ 4854999 (-)
CI01000012_04879477_04890031 FRMD6 coding upstream 372170 4879440 ~ 4890031 (-)
CI01000012_04926292_04930302 TMX1 coding upstream 418226 4925496 ~ 4930474 (-)
CI01000012_05022143_05030697 ATL1 coding upstream 514473 5021743 ~ 5030697 (-)
G71892 NA non-coding downstream 8795 4495201 ~ 4497795 (-)
G71890 NA non-coding downstream 16551 4441757 ~ 4490039 (-)
G71887 NA non-coding downstream 18638 4432908 ~ 4487952 (-)
G71957 NA non-coding downstream 28650 4468440 ~ 4477940 (-)
G71895 NA non-coding downstream 79960 4424991 ~ 4426630 (-)
G71977 NA non-coding upstream 14698 4521968 ~ 4522241 (-)
G71979 NA non-coding upstream 21154 4528424 ~ 4584413 (-)
G71906 NA non-coding upstream 22087 4529357 ~ 4585174 (-)
G71897 NA non-coding upstream 75585 4582855 ~ 4586116 (-)
G72014 NA non-coding upstream 119649 4626919 ~ 4627180 (-)
G70774 NA other downstream 1639698 2866508 ~ 2866892 (-)
G69562 NA other downstream 3130292 1332075 ~ 1376298 (-)
CI01000012_01139864_01192154 TTC7A other downstream 3355392 1135676 ~ 1192154 (-)
G69332 NA other downstream 3730711 775364 ~ 775879 (-)
G69277 NA other downstream 3776125 729920 ~ 730465 (-)
G71898 NA other upstream 26260 4533530 ~ 4534672 (-)
G72068 NA other upstream 268950 4776220 ~ 4780132 (-)
G72204 NA other upstream 786503 5293773 ~ 5302206 (-)
CI01000012_05414096_05416676 TTC9 other upstream 856372 5413369 ~ 5416780 (-)
G72294 NA other upstream 955570 5462840 ~ 5465857 (-)

Expression


Co-expression Network