Gene
RNA
| Item | Value |
|---|---|
| gene id | G71977 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 4521968 ~ 4522241 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82064 | True | 250 | lncRNA | 0.33 | 2 | 4521968 | 4522241 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_04404769_04419096 | PHF3 | coding | downstream | 102872 | 4404326 ~ 4419096 (-) |
| CI01000012_04375448_04378813 | NA | coding | downstream | 142564 | 4375358 ~ 4379404 (-) |
| CI01000012_04048205_04049218 | NA | coding | downstream | 472462 | 4046153 ~ 4049506 (-) |
| CI01000012_03963989_03965578 | NA | coding | downstream | 556228 | 3963173 ~ 3965740 (-) |
| CI01000012_03875714_03882574 | NA | coding | downstream | 639394 | 3875082 ~ 3882574 (-) |
| CI01000012_04706769_04709074 | GPHB5 | coding | upstream | 184460 | 4706701 ~ 4709074 (-) |
| CI01000012_04839741_04854323 | NA | coding | upstream | 317234 | 4839475 ~ 4854999 (-) |
| CI01000012_04879477_04890031 | FRMD6 | coding | upstream | 357199 | 4879440 ~ 4890031 (-) |
| CI01000012_04926292_04930302 | TMX1 | coding | upstream | 403255 | 4925496 ~ 4930474 (-) |
| CI01000012_05022143_05030697 | ATL1 | coding | upstream | 499502 | 5021743 ~ 5030697 (-) |
| G71971 | NA | non-coding | downstream | 14698 | 4506590 ~ 4507270 (-) |
| G71892 | NA | non-coding | downstream | 24173 | 4495201 ~ 4497795 (-) |
| G71890 | NA | non-coding | downstream | 31929 | 4441757 ~ 4490039 (-) |
| G71887 | NA | non-coding | downstream | 34016 | 4432908 ~ 4487952 (-) |
| G71957 | NA | non-coding | downstream | 44028 | 4468440 ~ 4477940 (-) |
| G71979 | NA | non-coding | upstream | 6183 | 4528424 ~ 4584413 (-) |
| G71906 | NA | non-coding | upstream | 7116 | 4529357 ~ 4585174 (-) |
| G71897 | NA | non-coding | upstream | 60614 | 4582855 ~ 4586116 (-) |
| G72014 | NA | non-coding | upstream | 104678 | 4626919 ~ 4627180 (-) |
| G72016 | NA | non-coding | upstream | 106003 | 4628244 ~ 4628572 (-) |
| G70774 | NA | other | downstream | 1655076 | 2866508 ~ 2866892 (-) |
| G69562 | NA | other | downstream | 3145670 | 1332075 ~ 1376298 (-) |
| CI01000012_01139864_01192154 | TTC7A | other | downstream | 3370770 | 1135676 ~ 1192154 (-) |
| G69332 | NA | other | downstream | 3746089 | 775364 ~ 775879 (-) |
| G69277 | NA | other | downstream | 3791503 | 729920 ~ 730465 (-) |
| G71898 | NA | other | upstream | 11289 | 4533530 ~ 4534672 (-) |
| G72068 | NA | other | upstream | 253979 | 4776220 ~ 4780132 (-) |
| G72204 | NA | other | upstream | 771532 | 5293773 ~ 5302206 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | upstream | 841401 | 5413369 ~ 5416780 (-) |
| G72294 | NA | other | upstream | 940599 | 5462840 ~ 5465857 (-) |
