G188206


Basic Information

Item Value
gene id G188206
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 9020635 ~ 9020895 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU255234
gtttcctccgggtgctccggtttcctcccacagtccaaagacggcacgttcaggctaattggatgtcGGATACAAATTgcccctaggtgtgagtgtgtgaatgaatgtgtctgtgtgtctgtctgtgtctgtctgccctgtgatggattggcggcctgtccagggtgtatcctgccttccgcccgatgccggctgggataggctccagcacccccccgcgacccttaatggatgaagcggttgataatgacttgacttgac

Function

NR:

description
PREDICTED: clavesin-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255234 True 261 lncRNA 0.56 1 9020635 9020895

Neighbor

gene id symbol gene type direction distance location
LOC103024232 arhgef10la,LOC108438575,LOC107695083,LOC106565901 coding upstream 287510 8438713 ~ 8733125 (+)
LOC103046266 chd5,LOC107555845,LOC107691315 coding upstream 589573 8346072 ~ 8431062 (+)
LOC103047485 rpl22,LOC103047485,LOC108414460,LOC107737211,LOC107555851 coding upstream 677288 8332182 ~ 8343347 (+)
LOC103024538 draxin,LOC108413332,LOC106565906 coding upstream 775638 8193011 ~ 8244997 (+)
pank4 pank4,LOC107742899 coding upstream 845465 8141553 ~ 8175170 (+)
klhdc7a LOC108438577 coding downstream 815204 9836099 ~ 9839322 (+)
dhrs3 dhrs3,LOC108439496,LOC107555693,LOC107685629,LOC107749419,LOC107703071,LOC103042050,LOC106582983 coding downstream 1003097 10023992 ~ 10041141 (+)
LOC103039471 NA coding downstream 1099138 10120033 ~ 10132709 (+)
LOC111195373 NA coding downstream 1156235 10177130 ~ 10180602 (+)
LOC111195374 NA coding downstream 1193464 10214359 ~ 10214948 (+)
G188188 NA non-coding upstream 77013 8882968 ~ 8943622 (+)
G188191 NA non-coding upstream 90326 8929823 ~ 8930309 (+)
G188186 NA non-coding upstream 128868 8855506 ~ 8891767 (+)
G188185 NA non-coding upstream 171068 8849306 ~ 8849567 (+)
LOC111195453 NA non-coding upstream 200539 8819156 ~ 8820096 (+)
G188213 NA non-coding downstream 6653 9027548 ~ 9027859 (+)
G188219 NA non-coding downstream 104281 9125176 ~ 9125534 (+)
G188221 NA non-coding downstream 115375 9136270 ~ 9136618 (+)
G188222 NA non-coding downstream 152495 9173390 ~ 9173660 (+)
LOC111195368 NA non-coding downstream 731836 9752731 ~ 9754611 (+)
agtrap agtrap other upstream 748923 8256796 ~ 8271712 (+)
LOC111195452 NA other upstream 907393 8112003 ~ 8113242 (+)
trnaq-uug_4 NA other upstream 1828409 7192154 ~ 7192226 (+)
LOC103029365 NA other upstream 1921963 7077165 ~ 7098672 (+)
p3h1 NA other upstream 3221656 5779891 ~ 5798979 (+)
LOC103032765 igsf21,igsf21a,LOC108438574,LOC107749415,LOC107727841,LOC107685626 other downstream 262900 9283795 ~ 9819955 (+)
G188325 NA other downstream 833412 9854307 ~ 9856995 (+)
LOC111195371 NA other downstream 1080860 10101755 ~ 10106530 (+)
G188624 NA other downstream 1282465 10303360 ~ 10303665 (+)
G188771 NA other downstream 1827176 10848071 ~ 10852736 (+)

Expression


Co-expression Network