G188624


Basic Information

Item Value
gene id G188624
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 10303360 ~ 10303665 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU255727
gtcccatgctcattctaggggatatgaacatccacAACGACAGTACCAACTTTACAGACTTCTcatccctcatgcagtctttcgaactggagcaggtccccagccctccaacacataaagctggcaaacatctagacctgattttcactcgtaactgtgacaccgactctTTAACTGTCACTCCTTTGCACCTCTCGGATCACTACTTCATGAAACTCAATATTCATATTTCAAACAAACCCACGGCTACTCCTACGatggtctcgttccgccgaaatTTACGAGATATCTCAGCAGACCAGTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255727 True 306 TUCP 0.46 1 10303360 10303665

Neighbor

gene id symbol gene type direction distance location
LOC111195375 NA coding upstream 82230 10220542 ~ 10221130 (+)
LOC111195374 NA coding upstream 88412 10214359 ~ 10214948 (+)
LOC111195373 NA coding upstream 122758 10177130 ~ 10180602 (+)
LOC103039471 NA coding upstream 170651 10120033 ~ 10132709 (+)
dhrs3 dhrs3,LOC108439496,LOC107555693,LOC107685629,LOC107749419,LOC107703071,LOC103042050,LOC106582983 coding upstream 262219 10023992 ~ 10041141 (+)
LOC103026179 asic1,asic1b,LOC107721241 coding downstream 172274 10475939 ~ 10963809 (+)
LOC103041410 asic1b,LOC107569540 coding downstream 434389 10738054 ~ 10739675 (+)
slc25a26 slc25a26,LOC107753336,LOC107699790,LOC107753784,LOC107600283,LOC107656062 coding downstream 693674 10997339 ~ 11070355 (+)
kbtbd8 kbtbd8,LOC107600285,LOC107753780,LOC107656060,LOC107557775,LOC107729395 coding downstream 953493 11257158 ~ 11266360 (+)
LOC103022498 LOC108434863 coding downstream 969772 11273437 ~ 11303246 (+)
G188623 NA non-coding upstream 657 10302445 ~ 10302703 (+)
G188622 NA non-coding upstream 1980 10301168 ~ 10301380 (+)
G188527 NA non-coding upstream 74229 10228497 ~ 10229131 (+)
G188478 NA non-coding upstream 145904 10091209 ~ 10157456 (+)
G188366 NA non-coding upstream 236937 10065738 ~ 10066423 (+)
G188632 NA non-coding downstream 3721 10307386 ~ 10311022 (+)
G188639 NA non-coding downstream 19758 10323423 ~ 10323628 (+)
G188641 NA non-coding downstream 20056 10323721 ~ 10324107 (+)
G188643 NA non-coding downstream 21022 10324687 ~ 10325205 (+)
G188650 NA non-coding downstream 36990 10340655 ~ 10340895 (+)
LOC111195371 NA other upstream 196830 10101755 ~ 10106530 (+)
G188325 NA other upstream 446365 9854307 ~ 9856995 (+)
LOC103032765 igsf21,igsf21a,LOC108438574,LOC107749415,LOC107727841,LOC107685626 other upstream 483405 9283795 ~ 9819955 (+)
agtrap agtrap other upstream 2031648 8256796 ~ 8271712 (+)
LOC111195452 NA other upstream 2190118 8112003 ~ 8113242 (+)
G188771 NA other downstream 544406 10848071 ~ 10852736 (+)
G188923 lrig1,LOC107557776,LOC107753782,LOC107600281 other downstream 786063 11089728 ~ 11090047 (+)
G188968 suclg2,LOC107753779,LOC107656059,LOC107729402,LOC107699794 other downstream 1147714 11451379 ~ 11464480 (+)
fam19a1 fam19a1,LOC108280984,LOC107729407,LOC106583036,LOC105017301,LOC107600286 other downstream 1387207 11690872 ~ 12000663 (+)
G189073 hmces other downstream 1927122 12230787 ~ 12236092 (+)

Expression


Co-expression Network