Gene
RNA
| Item | Value |
|---|---|
| gene id | G71237 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 4792538 ~ 4850513 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU81217 | True | 331 | lncRNA | 0.46 | 2 | 4792538 | 4850513 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_04647182_04692241 | KCNH5, KCNH5B | coding | upstream | 100062 | 4647182 ~ 4692476 (+) |
| CI01000012_04595199_04620295 | PPP2R5EB, 2A5E, PPP2R5E1, PPP2R5E | coding | upstream | 172085 | 4593867 ~ 4620453 (+) |
| CI01000012_04578508_04582452 | WDR89 | coding | upstream | 209928 | 4576995 ~ 4582610 (+) |
| CI01000012_04551570_04571150 | SGPP1 | coding | upstream | 221199 | 4551169 ~ 4571339 (+) |
| CI01000012_04514814_04539220 | SYT16 | coding | upstream | 252939 | 4514814 ~ 4539599 (+) |
| CI01000012_04939174_04962741 | TRIM9 | coding | downstream | 87633 | 4938146 ~ 4962741 (+) |
| CI01000012_04966772_04976751 | PYGL | coding | downstream | 116202 | 4966715 ~ 4976903 (+) |
| CI01000012_04981435_05004449 | NIN | coding | downstream | 130922 | 4981435 ~ 5005112 (+) |
| CI01000012_05006941_05018373 | SAV1 | coding | downstream | 156428 | 5006941 ~ 5018880 (+) |
| CI01000012_05035890_05063488 | MAP4K5 | coding | downstream | 185013 | 5035526 ~ 5064475 (+) |
| G71478 | NA | non-coding | upstream | 1672 | 4790656 ~ 4790866 (+) |
| G71208 | NA | non-coding | upstream | 81615 | 4706556 ~ 4710923 (+) |
| G71442 | NA | non-coding | upstream | 150690 | 4641537 ~ 4641848 (+) |
| G71239 | NA | non-coding | upstream | 207317 | 4529356 ~ 4585221 (+) |
| G71488 | NA | non-coding | downstream | 20075 | 4870588 ~ 4870819 (+) |
| G71490 | NA | non-coding | downstream | 24512 | 4875025 ~ 4875314 (+) |
| G71198 | NA | non-coding | downstream | 25892 | 4876405 ~ 4878412 (+) |
| G71491 | NA | non-coding | downstream | 28105 | 4878618 ~ 4878844 (+) |
| G71503 | NA | non-coding | downstream | 55412 | 4905925 ~ 4906215 (+) |
| CI01000012_04495631_04501066 | NA | other | upstream | 292449 | 4495631 ~ 4501066 (+) |
| CI01000012_04424569_04425090 | NA | other | upstream | 366891 | 4424569 ~ 4425756 (+) |
| G70029 | NA | other | upstream | 2161153 | 2622478 ~ 2631385 (+) |
| G68725 | NA | other | upstream | 4107682 | 683523 ~ 684856 (+) |
| CI01000012_05177587_05180517 | SRSF5A | other | downstream | 326382 | 5176895 ~ 5180970 (+) |
| G71199 | NA | other | downstream | 562737 | 5413250 ~ 5416785 (+) |
| G71218 | NA | other | downstream | 685339 | 5535852 ~ 5538384 (+) |
| G71221 | NA | other | downstream | 688012 | 5538525 ~ 5540456 (+) |
| G71548 | NA | other | downstream | 699980 | 5550493 ~ 5561433 (+) |
