G71488


Basic Information

Item Value
gene id G71488
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4870588 ~ 4870819 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81470
CAGATCTTCAAAAAAAAAAAAAAAAAAAAACGCTTACACGGTCACAACAGAGCACCACCGCCACCTGTTGGACCATTAGAGCACTACTAAACCACCTACGTGAACGAGCACTGAAAATCACGATTGAGTTTTTCTGAAAATTCAAGGCGATAGCAGCAACCAGGAAGCCACAAACAGACAATAAAGAAAAACATCTGCAGATAAAGCACACACGCAGTGCCCTTTGTTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81470 True 232 lncRNA 0.42 1 4870588 4870819

Neighbor

gene id symbol gene type direction distance location
CI01000012_04722087_04836261 NA coding upstream 33014 4722087 ~ 4837574 (+)
CI01000012_04647182_04692241 KCNH5, KCNH5B coding upstream 178112 4647182 ~ 4692476 (+)
CI01000012_04595199_04620295 PPP2R5EB, 2A5E, PPP2R5E1, PPP2R5E coding upstream 250135 4593867 ~ 4620453 (+)
CI01000012_04578508_04582452 WDR89 coding upstream 287978 4576995 ~ 4582610 (+)
CI01000012_04551570_04571150 SGPP1 coding upstream 299249 4551169 ~ 4571339 (+)
CI01000012_04939174_04962741 TRIM9 coding downstream 67327 4938146 ~ 4962741 (+)
CI01000012_04966772_04976751 PYGL coding downstream 95896 4966715 ~ 4976903 (+)
CI01000012_04981435_05004449 NIN coding downstream 110616 4981435 ~ 5005112 (+)
CI01000012_05006941_05018373 SAV1 coding downstream 136122 5006941 ~ 5018880 (+)
CI01000012_05035890_05063488 MAP4K5 coding downstream 164707 5035526 ~ 5064475 (+)
G71237 NA non-coding upstream 20075 4792538 ~ 4850513 (+)
G71478 NA non-coding upstream 79722 4790656 ~ 4790866 (+)
G71208 NA non-coding upstream 159665 4706556 ~ 4710923 (+)
G71442 NA non-coding upstream 228740 4641537 ~ 4641848 (+)
G71239 NA non-coding upstream 285367 4529356 ~ 4585221 (+)
G71490 NA non-coding downstream 4206 4875025 ~ 4875314 (+)
G71198 NA non-coding downstream 5586 4876405 ~ 4878412 (+)
G71491 NA non-coding downstream 7799 4878618 ~ 4878844 (+)
G71503 NA non-coding downstream 35106 4905925 ~ 4906215 (+)
G71506 NA non-coding downstream 45228 4916047 ~ 4916273 (+)
CI01000012_04495631_04501066 NA other upstream 370499 4495631 ~ 4501066 (+)
CI01000012_04424569_04425090 NA other upstream 444941 4424569 ~ 4425756 (+)
G70029 NA other upstream 2239203 2622478 ~ 2631385 (+)
G68725 NA other upstream 4185732 683523 ~ 684856 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 306076 5176895 ~ 5180970 (+)
G71199 NA other downstream 542431 5413250 ~ 5416785 (+)
G71218 NA other downstream 665033 5535852 ~ 5538384 (+)
G71221 NA other downstream 667706 5538525 ~ 5540456 (+)
G71548 NA other downstream 679674 5550493 ~ 5561433 (+)

Expression


Co-expression Network