G71491


Basic Information

Item Value
gene id G71491
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 4878618 ~ 4878844 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81473
AAAAAAAAAAAAAAAAAAAAAAAAATCCATATTTAACAAGTTATGAAGTAAAATATCTAGCTTCCGCCAGACCGCCTTCCGTATTCAACTTACGAAGAAAGTGTAAAACTCTCGCAGTTCAAAATGCTTACAATACGTCCTTCACCTTCCCTATTCAACTTATGGAAAAAGCTTAGTTCCATTTTTTTCGTAATTTGAATACGGAAGGCGGTCTGGTGGAAGCTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81473 True 227 lncRNA 0.34 1 4878618 4878844

Neighbor

gene id symbol gene type direction distance location
CI01000012_04722087_04836261 NA coding upstream 41044 4722087 ~ 4837574 (+)
CI01000012_04647182_04692241 KCNH5, KCNH5B coding upstream 186142 4647182 ~ 4692476 (+)
CI01000012_04595199_04620295 PPP2R5EB, 2A5E, PPP2R5E1, PPP2R5E coding upstream 258165 4593867 ~ 4620453 (+)
CI01000012_04578508_04582452 WDR89 coding upstream 296008 4576995 ~ 4582610 (+)
CI01000012_04551570_04571150 SGPP1 coding upstream 307279 4551169 ~ 4571339 (+)
CI01000012_04939174_04962741 TRIM9 coding downstream 59302 4938146 ~ 4962741 (+)
CI01000012_04966772_04976751 PYGL coding downstream 87871 4966715 ~ 4976903 (+)
CI01000012_04981435_05004449 NIN coding downstream 102591 4981435 ~ 5005112 (+)
CI01000012_05006941_05018373 SAV1 coding downstream 128097 5006941 ~ 5018880 (+)
CI01000012_05035890_05063488 MAP4K5 coding downstream 156682 5035526 ~ 5064475 (+)
G71198 NA non-coding upstream 206 4876405 ~ 4878412 (+)
G71490 NA non-coding upstream 3304 4875025 ~ 4875314 (+)
G71488 NA non-coding upstream 7799 4870588 ~ 4870819 (+)
G71237 NA non-coding upstream 28105 4792538 ~ 4850513 (+)
G71478 NA non-coding upstream 87752 4790656 ~ 4790866 (+)
G71503 NA non-coding downstream 27081 4905925 ~ 4906215 (+)
G71506 NA non-coding downstream 37203 4916047 ~ 4916273 (+)
G71511 NA non-coding downstream 42880 4921724 ~ 4922067 (+)
G71512 NA non-coding downstream 46140 4924984 ~ 4926637 (+)
G71513 NA non-coding downstream 48850 4927694 ~ 4930335 (+)
CI01000012_04495631_04501066 NA other upstream 378529 4495631 ~ 4501066 (+)
CI01000012_04424569_04425090 NA other upstream 452971 4424569 ~ 4425756 (+)
G70029 NA other upstream 2247233 2622478 ~ 2631385 (+)
G68725 NA other upstream 4193762 683523 ~ 684856 (+)
CI01000012_05177587_05180517 SRSF5A other downstream 298051 5176895 ~ 5180970 (+)
G71199 NA other downstream 534406 5413250 ~ 5416785 (+)
G71218 NA other downstream 657008 5535852 ~ 5538384 (+)
G71221 NA other downstream 659681 5538525 ~ 5540456 (+)
G71548 NA other downstream 671649 5550493 ~ 5561433 (+)

Expression


Co-expression Network