G189841


Basic Information

Item Value
gene id G189841
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 14812998 ~ 14815031 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU257367
tcagagggagcaaaattggccccaggggcgccgagtggtccagcggtctaaagcgctgccactatgagcaggaggtcgccggttcgaacccctgctcatgcagctttgccatcaagctgtcagcgttagagggagcagaattggccctgctccctctgggtgggtagatggcgctctctccccacatcactcctatggtgatgtctgcagcacagggcgtctgtgagctgatgtaccagagccgaggcgctgtgctttcctccaagcgcgctggctgctcggcaatgctgcatcggcagcagctcgaaaagaagcggtggctgacttcacatgtatcggaggaagcatgtgttagtcttcaccctcctggtgtggtgaggtatcactagtgatagggggagtcctaatgaatgggttgggtaattggccgtgtaaattggggagaaaatgggaaaaattagaaataaaattataaaaaaaaaa

Function

GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
TU257367 True 483 lncRNA 0.54 2 14812998 14815031

Neighbor

gene id symbol gene type direction distance location
LOC103039903 LOC103039903,LOC108431517,LOC108255002,LOC107697969,LOC107598614,LOC107715030,LOC107671896,LOC102210977 coding downstream 17247 14786322 ~ 14795751 (-)
LOC103039087 NA coding downstream 34657 14767313 ~ 14778341 (-)
LOC103038772 NA coding downstream 48643 14754376 ~ 14764355 (-)
dnajc14 dnajc14,LOC107562234 coding downstream 84684 14720385 ~ 14728314 (-)
mcrs1 mcrs1,LOC107696040 coding downstream 118883 14679927 ~ 14694115 (-)
LOC103040538 si:ch73-190f16.2,nabp2,LOC108424604,LOC107557546,LOC108255000,LOC107572067 coding upstream 32091 14847122 ~ 14856386 (-)
LOC111195383 LOC108424608 coding upstream 139106 14954137 ~ 14955419 (-)
LOC103047892 LOC108424570 coding upstream 158547 14973578 ~ 14984895 (-)
fndc11 NA coding upstream 217242 15032273 ~ 15033061 (-)
LOC103021615 NA coding upstream 226644 15041675 ~ 15054177 (-)
G189837 ankrd52,LOC105017093,LOC106565408,LOC106583345 non-coding downstream 7126 14797593 ~ 14805872 (-)
G189823 NA non-coding downstream 13370 14717436 ~ 14799628 (-)
G189835 cnpy2,LOC103039390,LOC108431501,LOC107572063 non-coding downstream 30098 14780548 ~ 14782900 (-)
G189834 NA non-coding downstream 52624 14759788 ~ 14760374 (-)
G189821 inpp1 non-coding downstream 99265 14712883 ~ 14713733 (-)
G189845 ankrd52 non-coding upstream 10804 14825835 ~ 14830306 (-)
G189846 NA non-coding upstream 27545 14842576 ~ 14844243 (-)
G189852 NA non-coding upstream 51390 14866421 ~ 14867739 (-)
G189867 LOC108424607 non-coding upstream 91145 14906176 ~ 14914065 (-)
G189951 NA non-coding upstream 224950 15039981 ~ 15041242 (-)
tsen2 NA other downstream 1736256 13062799 ~ 13076742 (-)
LOC111195455 NA other downstream 2098966 12612611 ~ 12714032 (-)
G189335 psma5,LOC107685984 other downstream 2193432 12614912 ~ 12619566 (-)
mapkapk3 mapkapk3,LOC102784126,LOC107384936,LOC101473327,LOC102305022,LOC102199310,LOC106525176 other downstream 2417466 12298049 ~ 12395532 (-)
eogt eogt,LOC107729408 other downstream 2634388 12160542 ~ 12178610 (-)
LOC103024926 dynlrb1,LOC106565026 other upstream 503612 15318643 ~ 15322175 (-)
LOC103026676 LOC108424672,LOC108254855,LOC107691347,LOC107749448,LOC107685659,LOC107551122,LOC106582641 other upstream 594176 15409207 ~ 15466584 (-)
G190405 fbln2,LOC108424659,LOC107727849,LOC107691338 other upstream 1530670 16345701 ~ 16460928 (-)
ptpdc1 NA other upstream 1754592 16569623 ~ 16599317 (-)
cass4 NA other upstream 2018819 16833850 ~ 16869461 (-)

Expression


Co-expression Network