Gene
RNA
| Item | Value |
|---|---|
| gene id | G72141 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 4916436 ~ 4916669 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82284 | True | 234 | lncRNA | 0.36 | 1 | 4916436 | 4916669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_04879477_04890031 | FRMD6 | coding | downstream | 26405 | 4879440 ~ 4890031 (-) |
| CI01000012_04839741_04854323 | NA | coding | downstream | 61437 | 4839475 ~ 4854999 (-) |
| CI01000012_04706769_04709074 | GPHB5 | coding | downstream | 207362 | 4706701 ~ 4709074 (-) |
| CI01000012_04404769_04419096 | PHF3 | coding | downstream | 497340 | 4404326 ~ 4419096 (-) |
| CI01000012_04375448_04378813 | NA | coding | downstream | 537032 | 4375358 ~ 4379404 (-) |
| CI01000012_04926292_04930302 | TMX1 | coding | upstream | 8827 | 4925496 ~ 4930474 (-) |
| CI01000012_05022143_05030697 | ATL1 | coding | upstream | 105074 | 5021743 ~ 5030697 (-) |
| CI01000012_05079456_05083333 | ATP5S | coding | upstream | 162578 | 5079247 ~ 5083333 (-) |
| CI01000012_05091184_05092014 | NA | coding | upstream | 174352 | 5091021 ~ 5092014 (-) |
| CI01000012_05112839_05116264 | NA | coding | upstream | 194736 | 5111405 ~ 5116264 (-) |
| G72139 | NA | non-coding | downstream | 3249 | 4912904 ~ 4913187 (-) |
| G72135 | NA | non-coding | downstream | 9097 | 4906898 ~ 4907339 (-) |
| G72089 | NA | non-coding | downstream | 38025 | 4876403 ~ 4878411 (-) |
| G72130 | NA | non-coding | downstream | 45968 | 4870204 ~ 4870468 (-) |
| G72072 | NA | non-coding | downstream | 118875 | 4791395 ~ 4797561 (-) |
| G72099 | NA | non-coding | upstream | 42037 | 4958706 ~ 4966350 (-) |
| G72078 | NA | non-coding | upstream | 50081 | 4966750 ~ 4976926 (-) |
| G72087 | NA | non-coding | upstream | 89953 | 5006622 ~ 5008697 (-) |
| G72174 | NA | non-coding | upstream | 151093 | 5067762 ~ 5068870 (-) |
| G72114 | NA | non-coding | upstream | 250853 | 5167522 ~ 5168375 (-) |
| G72068 | NA | other | downstream | 136304 | 4776220 ~ 4780132 (-) |
| G71898 | NA | other | downstream | 381764 | 4533530 ~ 4534672 (-) |
| G70774 | NA | other | downstream | 2049544 | 2866508 ~ 2866892 (-) |
| G69562 | NA | other | downstream | 3540138 | 1332075 ~ 1376298 (-) |
| CI01000012_01139864_01192154 | TTC7A | other | downstream | 3765238 | 1135676 ~ 1192154 (-) |
| G72204 | NA | other | upstream | 377104 | 5293773 ~ 5302206 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | upstream | 446973 | 5413369 ~ 5416780 (-) |
| G72294 | NA | other | upstream | 546171 | 5462840 ~ 5465857 (-) |
| G72629 | NA | other | upstream | 1230342 | 6147011 ~ 6147494 (-) |
| CI01000012_07356934_07358497 | NA | other | upstream | 2438583 | 7356863 ~ 7358612 (-) |
