G190252


Basic Information

Item Value
gene id G190252
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 15909035 ~ 15909528 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU257957
gtgattagcagtgattagcatggtggtggtgtatgaggtgttagtgagtgttgagctggtacagtgagtggatcagatacagcagtgattagcagtgattagcatggtggtggtgtatgaggtgttagtgagtgttgagctggtggtacagtgagtggatcagatacagcagtgattagcatggtggtggtgtatgaggtgttagtgagtgttgagctggtggtacagtgagtggatcagatacagcagtgattagcagtgattagcatggtggtggtgtatgaggtgttagtgagtgttgagctggtacagtgagtggatca

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257957 True 323 lncRNA 0.47 2 15909035 15909528

Neighbor

gene id symbol gene type direction distance location
LOC103030277 LOC108415871 coding downstream 57844 15846861 ~ 15851191 (-)
LOC103047460 NA coding downstream 75314 15832088 ~ 15833721 (-)
LOC103030908 LOC103362890,LOC104939527,LOC101063010 coding downstream 83796 15814220 ~ 15825239 (-)
acad9 acad9,LOC107749438,LOC107566791,LOC107551129 coding downstream 124381 15765883 ~ 15784654 (-)
efcc1 efcc1,LOC107581369 coding downstream 147433 15723299 ~ 15761602 (-)
wnt7a wnt7a,wnt7aa,LOC108424657,LOC107749431,LOC107685644,LOC107727836 coding upstream 611016 16520544 ~ 16556758 (-)
phf2 phf2 coding upstream 829759 16739287 ~ 16794230 (-)
fam120a fam120a,LOC107685640,LOC107691381 coding upstream 887340 16796868 ~ 16827437 (-)
cstf1 cstf1 coding upstream 965880 16875408 ~ 16884596 (-)
LOC103036783 NA coding upstream 977183 16886711 ~ 16954694 (-)
G190232 NA non-coding downstream 42856 15790725 ~ 15866179 (-)
G190214 NA non-coding downstream 110278 15718099 ~ 15798757 (-)
G190204 NA non-coding downstream 301130 15597327 ~ 15607905 (-)
G190199 NA non-coding downstream 339764 15556521 ~ 15569271 (-)
G190183 NA non-coding downstream 457465 15388095 ~ 15451570 (-)
G190257 NA non-coding upstream 56967 15966495 ~ 15969045 (-)
G190265 NA non-coding upstream 85668 15995196 ~ 16002227 (-)
G190268 NA non-coding upstream 92736 16002264 ~ 16043340 (-)
G190234 NA non-coding upstream 104739 16014267 ~ 16016150 (-)
G190287 NA non-coding upstream 140557 16050085 ~ 16075172 (-)
LOC103026676 LOC108424672,LOC108254855,LOC107691347,LOC107749448,LOC107685659,LOC107551122,LOC106582641 other downstream 442451 15409207 ~ 15466584 (-)
LOC103024926 dynlrb1,LOC106565026 other downstream 586860 15318643 ~ 15322175 (-)
tsen2 NA other downstream 2832293 13062799 ~ 13076742 (-)
LOC111195455 NA other downstream 3195003 12612611 ~ 12714032 (-)
G190405 fbln2,LOC108424659,LOC107727849,LOC107691338 other upstream 436173 16345701 ~ 16460928 (-)
ptpdc1 NA other upstream 660095 16569623 ~ 16599317 (-)
cass4 NA other upstream 924322 16833850 ~ 16869461 (-)
irf6 irf6,LOC107599105,LOC106565674 other upstream 1271586 17181114 ~ 17193747 (-)
G190788 NA other upstream 1307793 17217321 ~ 17219780 (-)

Expression


Co-expression Network