G190268


Basic Information

Item Value
gene id G190268
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 16002264 ~ 16043340 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU257976
atgaaaaaaactgtgattaaaaaccagggttattccaccaaatattgattatttctgaactcttaaaactttatgaatatgaacttgttttctttgcattatttgaggactgaaagctctgcatttctttttttgttatttcagccatttctcattttctgtaaataaatcataaatgttataaatggcaatatttttatttggaattattaaacatttatctataaatagcaaaatctgagaaattcagaaatggaagtggtctcttaatttggtTGTTGGGCgtgtcagtatgtctttgctatcgtagcattgggaaaagtacacctgtGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257976 True 335 lncRNA 0.29 2 16002264 16043340

Neighbor

gene id symbol gene type direction distance location
LOC103030277 LOC108415871 coding downstream 151073 15846861 ~ 15851191 (-)
LOC103047460 NA coding downstream 168543 15832088 ~ 15833721 (-)
LOC103030908 LOC103362890,LOC104939527,LOC101063010 coding downstream 177025 15814220 ~ 15825239 (-)
acad9 acad9,LOC107749438,LOC107566791,LOC107551129 coding downstream 217610 15765883 ~ 15784654 (-)
efcc1 efcc1,LOC107581369 coding downstream 240662 15723299 ~ 15761602 (-)
wnt7a wnt7a,wnt7aa,LOC108424657,LOC107749431,LOC107685644,LOC107727836 coding upstream 477204 16520544 ~ 16556758 (-)
phf2 phf2 coding upstream 695947 16739287 ~ 16794230 (-)
fam120a fam120a,LOC107685640,LOC107691381 coding upstream 753528 16796868 ~ 16827437 (-)
cstf1 cstf1 coding upstream 832068 16875408 ~ 16884596 (-)
LOC103036783 NA coding upstream 843371 16886711 ~ 16954694 (-)
G190265 NA non-coding downstream 37 15995196 ~ 16002227 (-)
G190257 NA non-coding downstream 33219 15966495 ~ 15969045 (-)
G190252 NA non-coding downstream 92736 15909035 ~ 15909528 (-)
G190232 NA non-coding downstream 136085 15790725 ~ 15866179 (-)
G190214 NA non-coding downstream 203507 15718099 ~ 15798757 (-)
G190287 NA non-coding upstream 6745 16050085 ~ 16075172 (-)
G190290 NA non-coding upstream 35676 16079016 ~ 16116363 (-)
G190297 NA non-coding upstream 115049 16158389 ~ 16177299 (-)
G190304 NA non-coding upstream 159250 16202590 ~ 16297324 (-)
G190306 NA non-coding upstream 193129 16236469 ~ 16237067 (-)
LOC103026676 LOC108424672,LOC108254855,LOC107691347,LOC107749448,LOC107685659,LOC107551122,LOC106582641 other downstream 535680 15409207 ~ 15466584 (-)
LOC103024926 dynlrb1,LOC106565026 other downstream 680089 15318643 ~ 15322175 (-)
tsen2 NA other downstream 2925522 13062799 ~ 13076742 (-)
LOC111195455 NA other downstream 3288232 12612611 ~ 12714032 (-)
G190405 fbln2,LOC108424659,LOC107727849,LOC107691338 other upstream 302361 16345701 ~ 16460928 (-)
ptpdc1 NA other upstream 526283 16569623 ~ 16599317 (-)
cass4 NA other upstream 790510 16833850 ~ 16869461 (-)
irf6 irf6,LOC107599105,LOC106565674 other upstream 1137774 17181114 ~ 17193747 (-)
G190788 NA other upstream 1173981 17217321 ~ 17219780 (-)

Expression


Co-expression Network